RNA id: trnal-uaa-10



Basic Information


Item Value
RNA id trnal-uaa-10
length 83
RNA type mRNA
GC content 0.52
exon number 1
gene id trnal-uaa-10
representative True

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 44242122 ~ 44242204 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ACCAGGATGGCCgagaggttaaggcgttggacttaaGATCCAATGTACATATGTCCTCGTGGGTTCGAACCCCACTCCTGGTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1776075 lncRNA downstream 8353 44233524 ~ 44233769 (-) True G1552255
TU1776063 lncRNA downstream 9133 44229930 ~ 44232989 (-) True G1552243
TU1776065 lncRNA downstream 30699 44211086 ~ 44211423 (-) True G1552245
TU1776064 lncRNA downstream 31640 44210247 ~ 44210482 (-) True G1552244
TU1775827 lncRNA downstream 38894 44202990 ~ 44203228 (-) True G1552035
TU1776087 lncRNA upstream 16396 44258600 ~ 44261253 (-) False trnal-uaa-28
TU1776086 lncRNA upstream 18752 44260956 ~ 44264051 (-) True trnal-uaa-28
TU1776096 lncRNA upstream 33401 44275605 ~ 44276650 (-) True trnal-uaa-48
TU1776156 lncRNA upstream 142034 44384238 ~ 44384491 (-) True G1552331
TU1776173 lncRNA upstream 168484 44410688 ~ 44411062 (-) True G1552348
trnal-uaa-9 mRNA downstream 739 44241301 ~ 44241383 (-) True trnal-uaa-9
trnal-uaa-8 mRNA downstream 1538 44240502 ~ 44240584 (-) True trnal-uaa-8
trnal-uaa-7 mRNA downstream 2359 44239681 ~ 44239763 (-) True trnal-uaa-7
trnal-uaa-6 mRNA downstream 3157 44238883 ~ 44238965 (-) True trnal-uaa-6
trnal-uaa-5 mRNA downstream 3978 44238062 ~ 44238144 (-) True trnal-uaa-5
trnal-uaa-11 mRNA upstream 717 44242921 ~ 44243003 (-) True trnal-uaa-11
trnal-uaa-12 mRNA upstream 1538 44243742 ~ 44243824 (-) True trnal-uaa-12
trnal-uaa-13 mRNA upstream 2337 44244541 ~ 44244623 (-) True trnal-uaa-13
trnal-uaa-14 mRNA upstream 3158 44245362 ~ 44245444 (-) True trnal-uaa-14
trnal-uaa-15 mRNA upstream 3970 44246174 ~ 44246256 (-) True trnal-uaa-15
TU1775356 other downstream 609245 43631006 ~ 43632877 (-) True LOC118940987
TU1774438 other downstream 1227003 42961990 ~ 43015119 (-) False LOC118936491
TU1776616 other upstream 578559 44820763 ~ 44828808 (-) True G1552768
TU1776725 other upstream 805476 45047680 ~ 45087786 (-) False G1552866
TU1776762 other upstream 822930 45065134 ~ 45073340 (-) True G1552875
TU1777490 other upstream 1425157 45667361 ~ 45667740 (-) True G1553544
TU1777651 other upstream 1545895 45788099 ~ 45792133 (-) False G1553693