RNA id: trnal-uaa-15


Basic Information

Item Value
RNA id trnal-uaa-15
length 83
RNA type mRNA
GC content 0.53
exon number 1
gene id trnal-uaa-15
representative True

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 44246174 ~ 44246256 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ACCAGGATGGCCgagaggttaaggcgttggacttaaGATCCAATGGACATATGTCCTCGTGGGTTCGAACCCCACTCCTGGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1776075 lncRNA downstream 12405 44233524 ~ 44233769 (-) True G1552255
TU1776063 lncRNA downstream 13185 44229930 ~ 44232989 (-) True G1552243
TU1776065 lncRNA downstream 34751 44211086 ~ 44211423 (-) True G1552245
TU1776064 lncRNA downstream 35692 44210247 ~ 44210482 (-) True G1552244
TU1775827 lncRNA downstream 42946 44202990 ~ 44203228 (-) True G1552035
TU1776087 lncRNA upstream 12344 44258600 ~ 44261253 (-) False trnal-uaa-28
TU1776086 lncRNA upstream 14700 44260956 ~ 44264051 (-) True trnal-uaa-28
TU1776096 lncRNA upstream 29349 44275605 ~ 44276650 (-) True trnal-uaa-48
TU1776156 lncRNA upstream 137982 44384238 ~ 44384491 (-) True G1552331
TU1776173 lncRNA upstream 164432 44410688 ~ 44411062 (-) True G1552348
trnal-uaa-14 mRNA downstream 730 44245362 ~ 44245444 (-) True trnal-uaa-14
trnal-uaa-13 mRNA downstream 1551 44244541 ~ 44244623 (-) True trnal-uaa-13
trnal-uaa-12 mRNA downstream 2350 44243742 ~ 44243824 (-) True trnal-uaa-12
trnal-uaa-11 mRNA downstream 3171 44242921 ~ 44243003 (-) True trnal-uaa-11
trnal-uaa-10 mRNA downstream 3970 44242122 ~ 44242204 (-) True trnal-uaa-10
trnal-uaa-16 mRNA upstream 730 44246986 ~ 44247068 (-) True trnal-uaa-16
trnal-uaa-17 mRNA upstream 1529 44247785 ~ 44247867 (-) True trnal-uaa-17
trnal-uaa-18 mRNA upstream 2338 44248594 ~ 44248676 (-) True trnal-uaa-18
trnal-uaa-19 mRNA upstream 3148 44249404 ~ 44249486 (-) True trnal-uaa-19
trnal-uaa-20 mRNA upstream 3958 44250214 ~ 44250296 (-) True trnal-uaa-20
TU1775356 other downstream 613297 43631006 ~ 43632877 (-) True LOC118940987
TU1774438 other downstream 1231055 42961990 ~ 43015119 (-) False LOC118936491
TU1776616 other upstream 574507 44820763 ~ 44828808 (-) True G1552768
TU1776725 other upstream 801424 45047680 ~ 45087786 (-) False G1552866
TU1776762 other upstream 818878 45065134 ~ 45073340 (-) True G1552875
TU1777490 other upstream 1421105 45667361 ~ 45667740 (-) True G1553544
TU1777651 other upstream 1541843 45788099 ~ 45792133 (-) False G1553693