Gene
RNA
| Item | Value |
|---|---|
| RNA id | NM_001165089.2 |
| length | 617 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 4 |
| gene id | rfa3 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 50148304 ~ 50149605 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|---|
| K10740 | RPA3; replication factor A3 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1783113 | lncRNA | downstream | 141726 | 50006344 ~ 50006578 (-) | True | G1558557 |
| TU1783107 | lncRNA | downstream | 146322 | 49992109 ~ 50001982 (-) | True | G1558551 |
| TU1783010 | lncRNA | downstream | 225613 | 49921197 ~ 49922691 (-) | False | G1558460 |
| TU1783011 | lncRNA | downstream | 225613 | 49921197 ~ 49922691 (-) | True | G1558460 |
| TU1783009 | lncRNA | downstream | 225647 | 49921197 ~ 49922657 (-) | False | G1558460 |
| TU1783207 | lncRNA | upstream | 1293 | 50150898 ~ 50151114 (-) | True | G1558639 |
| TU1783217 | lncRNA | upstream | 8194 | 50157799 ~ 50158258 (-) | True | G1558649 |
| TU1783209 | lncRNA | upstream | 10082 | 50159687 ~ 50164221 (-) | True | G1558641 |
| TU1783270 | lncRNA | upstream | 95336 | 50244941 ~ 50245230 (-) | True | G1558698 |
| TU1783271 | lncRNA | upstream | 95949 | 50245554 ~ 50245787 (-) | True | G1558699 |
| XM_036953015.1 | mRNA | downstream | 4936 | 50105282 ~ 50143368 (-) | True | LOC110496842 |
| XM_036953016.1 | mRNA | downstream | 6899 | 50105282 ~ 50141405 (-) | False | LOC110496842 |
| XM_036953014.1 | mRNA | downstream | 114137 | 50023087 ~ 50034167 (-) | False | LOC110496434 |
| XM_021572331.2 | mRNA | downstream | 165734 | 49973454 ~ 49982570 (-) | True | LOC110496431 |
| XM_021572330.2 | mRNA | downstream | 165736 | 49973454 ~ 49982568 (-) | False | LOC110496431 |
| XR_005037496.1 | mRNA | upstream | 2418 | 50152023 ~ 50197214 (-) | True | LOC118941183 |
| XM_036953024.1 | mRNA | upstream | 106416 | 50256021 ~ 50359132 (-) | False | LOC110496438 |
| XM_036953025.1 | mRNA | upstream | 106416 | 50256021 ~ 50359132 (-) | False | LOC110496438 |
| XM_021572345.2 | mRNA | upstream | 106417 | 50256022 ~ 50359132 (-) | False | LOC110496438 |
| XM_021572346.2 | mRNA | upstream | 106417 | 50256022 ~ 50359132 (-) | False | LOC110496438 |
| TU1783125 | other | downstream | 114163 | 50023091 ~ 50034141 (-) | True | LOC110496434 |
| TU1783089 | other | downstream | 179696 | 49967896 ~ 49968608 (-) | True | G1558535 |
| TU1780876 | other | downstream | 1791457 | 48356613 ~ 48356847 (-) | True | G1556577 |
| TU1780583 | other | downstream | 2164695 | 47982883 ~ 47983609 (-) | True | LOC110496401 |
| TU1780537 | other | downstream | 2202730 | 47904839 ~ 47945574 (-) | True | LOC110496837 |
| TU1783393 | other | upstream | 206664 | 50356269 ~ 50359030 (-) | True | LOC110496438 |
| TU1783548 | other | upstream | 287392 | 50436997 ~ 50437459 (-) | True | G1558916 |
| TU1783852 | other | upstream | 473486 | 50623091 ~ 50623983 (-) | True | G1559205 |
| TU1783839 | other | upstream | 485798 | 50635403 ~ 50650253 (-) | True | thsd7aa |
| TU1785000 | other | upstream | 1063550 | 51213155 ~ 51214144 (-) | True | LOC110496463 |
