RNA id: XM_036953087.1


Basic Information

Item Value
RNA id XM_036953087.1
length 2110
RNA type mRNA
GC content 0.48
exon number 4
gene id sesn2
representative False

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 52428225 ~ 52436609 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GCTGTCACACACTACATGACATGACTACAGGCTGTCACACGCTACATGACATGACTACAGGCTGTCACACGCTACATGACATGACTACAGGCTGCTCTACTATACACACTACGGGCTGTCACACGCTACGCTACATGACTAAGGGCTGTCACGCGCTACATGACATGACTACAGGCTGTCACACGCTACGCTACCTGACTACGGGCTGTCACACACTACATGACATGACTACGGGCTGTCACACGCTACATGACATGACTACAGGCTGTCACACGCTATATGACATGACTACAGGCTGTCACACACTACATGACATGACTACGGGCTGTCACACGCTACGCTACATGACTACAGGCTGTCACACGCTACATGACATGACTACAGGCTGCTCTACTATACACACTACGGGCTGTCACACACTACATGACATGACTACAGGCTGTCACACACTACATGACATGACTACAGGCTGCTCTACTATACACACTACGGGCTGTCACACGCTACATGACATGACTACAGGCTGTCACACGCTACATGACATGAGTACAGGCTGTCACACACTACATGCCATGACTACAGGCTGTCACACACTACATGACATGACTACAGGCTGTCACACACTACATGACATGACTACAGGCTGCTCTACTATACACACTACGGGCTGTCACACGCTACATGACATGACTACAGGCTGTCACACGCTACATGACATGACTACAGGCTGTCACACACTACATGCCATGACTACAGGCTGTCACACACTACATGACATGACTACAGGCTGTCACACACTACATGACATGACTACAGGCTGCTCTACTATACACACTACAGGCTGTCACACGCTACATGACATGACTACAGGCTGCTCTACTATACACACTACGGGCTGTCACACGCTACATGACATGACTACAGGCTGTCACACACTACATGACATGACTACAGGCTGCTCTACTATACACACTACGGGCTGTCACACGCTACATGACATGACTACAGGCTGCTCTACTATACACACTACGGGCTGTCACACGCTACATGACATGACTACAGGCTGTCACACGCTACATGACATGACTAAAGGCTGTCACACACTACATGCCATGACTACAGGCTGTCACACACTACATGACATGACTACAGGCTGTCACACACTACATGACATGACTACAGGCTGCTCTACTATACACACTACAGGCTGTCACACGCTACATGACATGACTACAGGCTGCTCTACTATACACACTACGGGCTGTCACACGCTACATGACATGACTACAGGCTGCTCTACTATACACACTACGGGCTGTCACACGCTACATGACATGACTACAGGCTGTCACACACTACATGACATGACTACAGGCTGCTCTACTATACACACTACGGGCTGTCACACACTACATGACATGACTACGGGCTGTCACACGCTACATGACATGACTACGGGCTGTCACACGCTACATGACTACGGGCTGTCACACGCTACATGACTACGGGCTGTCACACGCTACATGACTACGGGCTGTCACACGCTACATGACTACGGGCTGTCACACGCTACATGACTACGGGCTGTCACACGCTACATGACTACGGGCCTGTCACACGCTACATGACTACGGGCCTGTCACACGCTACATGACTACGGGCCTGTCACACGCTACATGACTACGGGCTGTCACACGCTACATGACTACGGGCCTGTCACACGCTACATGACTACGGGCTGTCACACGCTACATGACTACGGGCCTGTCACACGCTACATGACTATGGGCTGTCACACGCTACATGACTACACACAGTTAATGTCTGAATCCGACAGTTCAGATTGATCATAAGTCAATGTTGTGTTTATTCTGCTCTGTGTAATAAGCTGCCTATTTTGTGTTTGTGGTTATAATGCTACACATTATAGAGTTAGGTTGatccagtcaatcaatcaatcatctcACTGTGTTAAACGATTATTGTACTAGCTACTGTGTTCACAGTGGCTGTTACCATTTAATGCTTCAGATCATACATAAGACAATTGAATGAATGgttcatgtattttttttaatgtacaataaaatgtattttgttatcAAAATCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1786205 lncRNA downstream 15222 52411530 ~ 52413003 (-) True G1561306
TU1786203 lncRNA downstream 15845 52411046 ~ 52412380 (-) True G1561305
TU1786138 lncRNA downstream 31630 52360300 ~ 52396595 (-) True LOC110496491
TU1786139 lncRNA downstream 70313 52357494 ~ 52357912 (-) False LOC110496491
TU1786136 lncRNA downstream 72394 52355342 ~ 52355831 (-) False LOC110496491
TU1786186 lncRNA upstream 178194 52609103 ~ 52612099 (-) True G1561290
TU1786267 lncRNA upstream 201772 52632681 ~ 52635148 (-) False G1561366
TU1786268 lncRNA upstream 201772 52632681 ~ 52633827 (-) True G1561366
TU1786269 lncRNA upstream 202579 52633488 ~ 52634262 (-) True G1561367
TU1786181 lncRNA upstream 209408 52640317 ~ 52641070 (-) True G1561285
XM_036953130.1 mRNA downstream 95 52398658 ~ 52428130 (-) False LOC110496493
XM_021572428.2 mRNA downstream 96 52399047 ~ 52428129 (-) True LOC110496493
XM_021572427.2 mRNA downstream 97 52399047 ~ 52428128 (-) False LOC110496493
XM_036951070.1 mRNA downstream 31247 52352725 ~ 52396978 (-) False LOC110496491
XM_021572424.2 mRNA downstream 76308 52331974 ~ 52351917 (-) True LOC110496489
XR_005037507.1 mRNA upstream 1065 52431974 ~ 52436609 (-) False sesn2
XR_005037506.1 mRNA upstream 1103 52432012 ~ 52436609 (-) False sesn2
XR_005037505.1 mRNA upstream 1128 52432037 ~ 52436609 (-) False sesn2
XR_005037503.1 mRNA upstream 1149 52432058 ~ 52436608 (-) False sesn2
XM_036953118.1 mRNA upstream 1149 52432058 ~ 52436609 (-) False sesn2
TU1786137 other downstream 70915 52356752 ~ 52357310 (-) False LOC110496491
TU1786055 other downstream 177736 52249354 ~ 52250489 (-) True G1561167
TU1786046 other downstream 245018 52179320 ~ 52183207 (-) True trak1b
TU1785112 other downstream 972940 51382672 ~ 51455285 (-) False G1560339
TU1785000 other downstream 1214081 51213155 ~ 51214144 (-) True LOC110496463
TU1786175 other upstream 214080 52644989 ~ 52647777 (-) True G1561279
TU1788031 other upstream 1167741 53598650 ~ 53602694 (-) True G1562762
TU1787983 other upstream 1190991 53621900 ~ 53628422 (-) False tomm7
TU1788090 other upstream 1321497 53752406 ~ 53752683 (-) True G1562816
TU1788103 other upstream 1443501 53874410 ~ 53875592 (-) True G1562828

Expression Profile