RNA id: NM_001124713.1


Basic Information

Item Value
RNA id NM_001124713.1
length 539
RNA type mRNA
GC content 0.53
exon number 4
gene id fabp3
representative True

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 52571332 ~ 52575201 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ctcactcactcactctctcattctgtttctgctctctcactccctctctcattcctccaCACTGCTAACAACATGGCTGAGGCATTCGCAGGCACATGGAACCTGAAGGACAGCAAGAACTTTGACGAATACATGAAGGCTCTGGGTGTGGGCTTTGCAACACGCCAGGTTGGCGGTATGACCAAGCCCACCACCATCATCGAGGTAGCTGGAGACACAGTCACTCTGAAGACACAGAGCACCTTCAAGAACACCGAGATCTCCTTCAAACTAGGAGCGGAGTTCGACGAGACCACCGCCGATGACAGGAAAGTCAAGtcCCTAATAACGATAGACGGTGGTAAGATGGTTCACGTGCAGAAGTGGGATGGCAAGGAGACCACTCTGGTCCGTGAAGTCAGCGGCAACGCCCTCGAACTGACTCTGACTCTGGGTGATGTCGTCTCCACACGCTCCTACGTCAAGGCCGAGTGACAACATTCCCCAAAAAACTGCACTACCCTTTGCCACACCTGCCCCCAAAAACAACCCTACCACTG

Function

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005737 cytoplasm cellular_component
GO:0005215 transporter activity molecular_function
GO:0008289 lipid binding molecular_function

KEGG:

id description
K08752 FABP3; fatty acid-binding protein 3, muscle and heart

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1786205 lncRNA downstream 158329 52411530 ~ 52413003 (-) True G1561306
TU1786203 lncRNA downstream 158952 52411046 ~ 52412380 (-) True G1561305
TU1786138 lncRNA downstream 174737 52360300 ~ 52396595 (-) True LOC110496491
TU1786139 lncRNA downstream 213420 52357494 ~ 52357912 (-) False LOC110496491
TU1786136 lncRNA downstream 215501 52355342 ~ 52355831 (-) False LOC110496491
TU1786186 lncRNA upstream 33902 52609103 ~ 52612099 (-) True G1561290
TU1786267 lncRNA upstream 57480 52632681 ~ 52635148 (-) False G1561366
TU1786268 lncRNA upstream 57480 52632681 ~ 52633827 (-) True G1561366
TU1786269 lncRNA upstream 58287 52633488 ~ 52634262 (-) True G1561367
TU1786181 lncRNA upstream 65116 52640317 ~ 52641070 (-) True G1561285
XM_036953147.1 mRNA downstream 7593 52558640 ~ 52563739 (-) True snrnp40
XM_036953146.1 mRNA downstream 7662 52558640 ~ 52563670 (-) False snrnp40
XM_036953145.1 mRNA downstream 10015 52558640 ~ 52561317 (-) False snrnp40
XM_036953151.1 mRNA downstream 13679 52552468 ~ 52557653 (-) True nkain1
XM_036953143.1 mRNA downstream 19705 52514685 ~ 52551627 (-) True pum1
XM_036953156.1 mRNA upstream 31501 52606702 ~ 52637728 (-) False arhgap4b
XM_036953154.1 mRNA upstream 31501 52606702 ~ 52637729 (-) False arhgap4b
XM_036953155.1 mRNA upstream 31501 52606702 ~ 52637730 (-) False arhgap4b
XM_036953157.1 mRNA upstream 32127 52607328 ~ 52637735 (-) True arhgap4b
XM_036953161.1 mRNA upstream 74670 52649871 ~ 52665504 (-) False arpp21
TU1786137 other downstream 214022 52356752 ~ 52357310 (-) False LOC110496491
TU1786055 other downstream 320843 52249354 ~ 52250489 (-) True G1561167
TU1786046 other downstream 388125 52179320 ~ 52183207 (-) True trak1b
TU1785112 other downstream 1116047 51382672 ~ 51455285 (-) False G1560339
TU1785000 other downstream 1357188 51213155 ~ 51214144 (-) True LOC110496463
TU1786175 other upstream 69788 52644989 ~ 52647777 (-) True G1561279
TU1788031 other upstream 1023449 53598650 ~ 53602694 (-) True G1562762
TU1787983 other upstream 1046699 53621900 ~ 53628422 (-) False tomm7
TU1788090 other upstream 1177205 53752406 ~ 53752683 (-) True G1562816
TU1788103 other upstream 1299209 53874410 ~ 53875592 (-) True G1562828

Expression Profile