Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1786905 |
| length | 585 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 1 |
| gene id | dync1li1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 53916292 ~ 53928304 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0007018 | microtubule-based movement | biological_process |
| GO:0005868 | cytoplasmic dynein complex | cellular_component |
| GO:0003777 | microtubule motor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1786961 | lncRNA | upstream | 12157 | 53915148 ~ 53915563 (+) | True | G1561891 |
| TU1786934 | lncRNA | upstream | 15000 | 53912243 ~ 53912720 (+) | True | G1561864 |
| TU1786908 | lncRNA | upstream | 32772 | 53887139 ~ 53894948 (+) | True | G1561843 |
| TU1786923 | lncRNA | upstream | 59314 | 53855267 ~ 53868406 (+) | True | G1561853 |
| TU1786927 | lncRNA | upstream | 135481 | 53791692 ~ 53792239 (+) | True | G1561857 |
| TU1787032 | lncRNA | downstream | 115768 | 54044072 ~ 54053417 (+) | False | G1561943 |
| TU1787034 | lncRNA | downstream | 115768 | 54044072 ~ 54050752 (+) | True | G1561943 |
| TU1787058 | lncRNA | downstream | 156564 | 54084868 ~ 54097923 (+) | True | G1561956 |
| TU1787089 | lncRNA | downstream | 190167 | 54118471 ~ 54118930 (+) | True | G1561987 |
| TU1787091 | lncRNA | downstream | 193427 | 54121731 ~ 54144598 (+) | True | G1561989 |
| XM_036953260.1 | mRNA | upstream | 45228 | 53812083 ~ 53882492 (+) | False | LOC110519664 |
| XM_036953259.1 | mRNA | upstream | 47257 | 53812084 ~ 53880463 (+) | False | LOC110519664 |
| XM_036953261.1 | mRNA | upstream | 47257 | 53812085 ~ 53880463 (+) | False | LOC110519664 |
| XM_036953262.1 | mRNA | upstream | 47257 | 53812087 ~ 53880463 (+) | True | LOC110519664 |
| XM_036951071.1 | mRNA | upstream | 197304 | 53713836 ~ 53730416 (+) | False | LOC110514975 |
| XM_036953266.1 | mRNA | downstream | 55333 | 53983637 ~ 54008038 (+) | True | LOC110496857 |
| XM_036953270.1 | mRNA | downstream | 93978 | 54022282 ~ 54036714 (+) | False | gmpr |
| XM_036953271.1 | mRNA | downstream | 94295 | 54022599 ~ 54036714 (+) | True | gmpr |
| XM_036951072.1 | mRNA | downstream | 326589 | 54254893 ~ 54258383 (+) | True | LOC118940998 |
| XM_036953274.1 | mRNA | downstream | 394513 | 54322817 ~ 54409921 (+) | False | LOC110496546 |
| TU1786926 | other | upstream | 50790 | 53872173 ~ 53876930 (+) | True | G1561856 |
| TU1786912 | other | upstream | 86849 | 53817164 ~ 53840871 (+) | False | G1561845 |
| TU1786915 | other | upstream | 101471 | 53817164 ~ 53826249 (+) | True | G1561845 |
| TU1786914 | other | upstream | 104857 | 53817164 ~ 53822863 (+) | False | G1561845 |
| TU1786837 | other | upstream | 203056 | 53720318 ~ 53724664 (+) | False | LOC110514975 |
| TU1787303 | other | downstream | 581454 | 54509758 ~ 54510746 (+) | True | LOC110496545 |
| TU1788910 | other | downstream | 1210344 | 55138648 ~ 55139231 (+) | True | G1563547 |
| TU1789919 | other | downstream | 1979946 | 55908250 ~ 55908934 (+) | False | G1564470 |
| TU1790095 | other | downstream | 2100634 | 56028938 ~ 56169203 (+) | False | LOC110496862 |
| TU1790119 | other | downstream | 2122284 | 56050588 ~ 56051793 (+) | True | G1564638 |
