Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1788181 |
| length | 1128 |
| lncRNA type | sense_over |
| GC content | 0.54 |
| exon number | 4 |
| gene id | atxn1a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 54048864 ~ 54244155 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1788179 | lncRNA | downstream | 9301 | 54044098 ~ 54047835 (-) | True | G1562891 |
| TU1788224 | lncRNA | downstream | 49130 | 54006086 ~ 54008006 (-) | True | G1562930 |
| TU1788149 | lncRNA | downstream | 128971 | 53927721 ~ 53928165 (-) | True | G1562866 |
| TU1788151 | lncRNA | downstream | 131658 | 53924660 ~ 53925478 (-) | True | G1562868 |
| TU1788141 | lncRNA | downstream | 148861 | 53908067 ~ 53908275 (-) | True | G1562860 |
| TU1788371 | lncRNA | upstream | 72007 | 54316125 ~ 54317470 (-) | True | LOC118941189 |
| TU1788411 | lncRNA | upstream | 125003 | 54369121 ~ 54371307 (-) | True | G1563100 |
| TU1788546 | lncRNA | upstream | 313426 | 54557544 ~ 54567610 (-) | True | G1563217 |
| TU1788572 | lncRNA | upstream | 362637 | 54606755 ~ 54609700 (-) | True | G1563234 |
| TU1788596 | lncRNA | upstream | 421611 | 54665729 ~ 54666665 (-) | True | G1563255 |
| XM_036953265.1 | mRNA | downstream | 141741 | 53902248 ~ 53915395 (-) | True | cpne4b |
| XM_036953263.1 | mRNA | downstream | 162134 | 53887137 ~ 53895002 (-) | False | mrpl3 |
| XM_036953264.1 | mRNA | downstream | 162155 | 53887137 ~ 53894981 (-) | False | mrpl3 |
| XR_005037512.1 | mRNA | downstream | 310129 | 53744387 ~ 53747007 (-) | False | LOC118941188 |
| XR_002469564.2 | mRNA | downstream | 316084 | 53738342 ~ 53741052 (-) | False | LOC110496535 |
| XM_021572499.2 | mRNA | upstream | 36426 | 54280544 ~ 54286577 (-) | True | LOC110496543 |
| XM_021572500.2 | mRNA | upstream | 70106 | 54314224 ~ 54315645 (-) | True | LOC110496544 |
| XM_036953272.1 | mRNA | upstream | 72006 | 54316124 ~ 54317624 (-) | False | LOC118941189 |
| XM_036953273.1 | mRNA | upstream | 72006 | 54316124 ~ 54317624 (-) | False | LOC118941189 |
| XM_036953285.1 | mRNA | upstream | 281575 | 54525693 ~ 54534269 (-) | False | tpd52 |
| TU1788095 | other | downstream | 162187 | 53889709 ~ 53894949 (-) | True | mrpl3 |
| TU1788103 | other | downstream | 181544 | 53874410 ~ 53875592 (-) | True | G1562828 |
| TU1788090 | other | downstream | 304453 | 53752406 ~ 53752683 (-) | True | G1562816 |
| TU1787983 | other | downstream | 428714 | 53621900 ~ 53628422 (-) | False | tomm7 |
| TU1788031 | other | downstream | 454442 | 53598650 ~ 53602694 (-) | True | G1562762 |
| TU1788544 | other | upstream | 394749 | 54638867 ~ 54652850 (-) | True | LOC110496860 |
| TU1788592 | other | upstream | 416508 | 54660626 ~ 54665643 (-) | True | G1563253 |
| TU1790620 | other | upstream | 2237350 | 56481468 ~ 56488289 (-) | True | G1565122 |
| TU1790882 | other | upstream | 2484234 | 56728352 ~ 56737347 (-) | True | LOC110496560 |
| TU1792637 | other | upstream | 3783393 | 58027511 ~ 58027790 (-) | True | G1566899 |
