Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1788371 |
| length | 410 |
| lncRNA type | sense_over |
| GC content | 0.46 |
| exon number | 3 |
| gene id | LOC118941189 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 54316124 ~ 54317624 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1788181 | lncRNA | downstream | 72007 | 54057136 ~ 54244118 (-) | True | atxn1a |
| TU1788307 | lncRNA | downstream | 80683 | 54235048 ~ 54235442 (-) | True | G1563002 |
| TU1788324 | lncRNA | downstream | 100363 | 54215427 ~ 54215762 (-) | True | G1563015 |
| TU1788280 | lncRNA | downstream | 192343 | 54123462 ~ 54123782 (-) | True | G1562978 |
| TU1788179 | lncRNA | downstream | 268290 | 54044098 ~ 54047835 (-) | True | G1562891 |
| TU1788411 | lncRNA | upstream | 51651 | 54369121 ~ 54371307 (-) | True | G1563100 |
| TU1788546 | lncRNA | upstream | 240074 | 54557544 ~ 54567610 (-) | True | G1563217 |
| TU1788572 | lncRNA | upstream | 289285 | 54606755 ~ 54609700 (-) | True | G1563234 |
| TU1788596 | lncRNA | upstream | 348259 | 54665729 ~ 54666665 (-) | True | G1563255 |
| TU1788608 | lncRNA | upstream | 366543 | 54684013 ~ 54687483 (-) | False | G1563266 |
| XM_021572500.2 | mRNA | downstream | 480 | 54314224 ~ 54315645 (-) | True | LOC110496544 |
| XM_021572499.2 | mRNA | downstream | 29548 | 54280544 ~ 54286577 (-) | True | LOC110496543 |
| XM_036953269.1 | mRNA | downstream | 71970 | 54048864 ~ 54244155 (-) | False | atxn1a |
| XM_036953267.1 | mRNA | downstream | 71971 | 54048864 ~ 54244154 (-) | False | atxn1a |
| XR_005037513.1 | mRNA | downstream | 71971 | 54048864 ~ 54244154 (-) | False | atxn1a |
| XM_036953285.1 | mRNA | upstream | 208223 | 54525693 ~ 54534269 (-) | False | tpd52 |
| XM_036953284.1 | mRNA | upstream | 208223 | 54525693 ~ 54534270 (-) | False | tpd52 |
| XM_036953292.1 | mRNA | upstream | 208223 | 54525693 ~ 54534270 (-) | False | tpd52 |
| XM_036953283.1 | mRNA | upstream | 208223 | 54525693 ~ 54534271 (-) | False | tpd52 |
| XM_036953290.1 | mRNA | upstream | 208223 | 54525693 ~ 54534273 (-) | False | tpd52 |
| TU1788095 | other | downstream | 421176 | 53889709 ~ 53894949 (-) | True | mrpl3 |
| TU1788103 | other | downstream | 440533 | 53874410 ~ 53875592 (-) | True | G1562828 |
| TU1788090 | other | downstream | 563442 | 53752406 ~ 53752683 (-) | True | G1562816 |
| TU1787983 | other | downstream | 687703 | 53621900 ~ 53628422 (-) | False | tomm7 |
| TU1788031 | other | downstream | 713431 | 53598650 ~ 53602694 (-) | True | G1562762 |
| TU1788544 | other | upstream | 321397 | 54638867 ~ 54652850 (-) | True | LOC110496860 |
| TU1788592 | other | upstream | 343156 | 54660626 ~ 54665643 (-) | True | G1563253 |
| TU1790620 | other | upstream | 2163998 | 56481468 ~ 56488289 (-) | True | G1565122 |
| TU1790882 | other | upstream | 2410882 | 56728352 ~ 56737347 (-) | True | LOC110496560 |
| TU1792637 | other | upstream | 3710041 | 58027511 ~ 58027790 (-) | True | G1566899 |
