Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021572953.2 |
| length | 1224 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 5 |
| gene id | LOC110496954 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 58326130 ~ 58338076 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005212 | structural constituent of eye lens | molecular_function |
| id | description |
|---|---|
| K24190 | LIM2; lens fiber membrane intrinsic protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1792072 | lncRNA | upstream | 17251 | 58307177 ~ 58308879 (+) | True | G1566416 |
| TU1792012 | lncRNA | upstream | 158927 | 58166996 ~ 58167203 (+) | True | G1566362 |
| TU1792011 | lncRNA | upstream | 160066 | 58165856 ~ 58166064 (+) | True | G1566361 |
| TU1792004 | lncRNA | upstream | 175893 | 58150012 ~ 58150237 (+) | True | G1566354 |
| TU1792002 | lncRNA | upstream | 179135 | 58146790 ~ 58146995 (+) | True | G1566352 |
| TU1792097 | lncRNA | downstream | 4364 | 58342440 ~ 58342708 (+) | True | G1566439 |
| TU1792098 | lncRNA | downstream | 5580 | 58343656 ~ 58343941 (+) | True | G1566440 |
| TU1792102 | lncRNA | downstream | 11454 | 58349530 ~ 58352481 (+) | True | G1566443 |
| TU1792118 | lncRNA | downstream | 40141 | 58378217 ~ 58379396 (+) | True | G1566457 |
| TU1792119 | lncRNA | downstream | 40606 | 58378682 ~ 58380984 (+) | False | LOC118941193 |
| XM_021572580.2 | mRNA | upstream | 113572 | 58188792 ~ 58212558 (+) | False | LOC110496595 |
| XM_021572581.2 | mRNA | upstream | 113572 | 58188792 ~ 58212558 (+) | True | LOC110496595 |
| XM_036953385.1 | mRNA | upstream | 138346 | 58182477 ~ 58187784 (+) | False | LOC110496594 |
| XR_005037517.1 | mRNA | downstream | 40619 | 58378695 ~ 58383251 (+) | False | LOC118941193 |
| XR_005037519.1 | mRNA | downstream | 42277 | 58380353 ~ 58383251 (+) | False | LOC118941193 |
| XR_005037518.1 | mRNA | downstream | 42573 | 58380649 ~ 58383249 (+) | False | LOC118941193 |
| XR_005037522.1 | mRNA | downstream | 45239 | 58383315 ~ 58384050 (+) | False | LOC118941195 |
| XR_005037521.1 | mRNA | downstream | 45629 | 58383705 ~ 58384050 (+) | True | LOC118941195 |
| TU1791846 | other | upstream | 379367 | 57941097 ~ 57946763 (+) | True | G1566224 |
| TU1791842 | other | upstream | 405484 | 57916615 ~ 57920646 (+) | True | LOC110496592 |
| TU1791820 | other | upstream | 463084 | 57851221 ~ 57863046 (+) | True | LOC110496591 |
| TU1791304 | other | upstream | 1214167 | 57109333 ~ 57111963 (+) | False | LOC110496571 |
| TU1791300 | other | upstream | 1214290 | 57109333 ~ 57111840 (+) | False | LOC110496571 |
| TU1792104 | other | downstream | 26180 | 58364256 ~ 58377006 (+) | True | G1566445 |
| TU1793356 | other | downstream | 532823 | 58870899 ~ 58873690 (+) | True | LOC110496618 |
| TU1793432 | other | downstream | 619045 | 58957121 ~ 58958851 (+) | True | dlx5a |
| TU1793473 | other | downstream | 686904 | 59024980 ~ 59035335 (+) | True | sem1 |
| TU1793654 | other | downstream | 971908 | 59309984 ~ 59312723 (+) | True | G1567716 |
