Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005037526.1 |
| length | 1450 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 5 |
| gene id | LOC110496637 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 59712624 ~ 59738593 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
59,712,000
59,716,000
59,720,000
59,724,000
59,728,000
59,732,000
59,732,000
59,736,000
59,740,000
59,744,000
59,748,000
59,752,000
NC_048582.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1794179 | lncRNA | downstream | 318517 | 59400053 ~ 59400923 (-) | True | G1568136 |
| TU1794165 | lncRNA | downstream | 344960 | 59370597 ~ 59374480 (-) | True | G1568122 |
| TU1794163 | lncRNA | downstream | 348333 | 59369575 ~ 59371107 (-) | True | G1568121 |
| TU1794066 | lncRNA | downstream | 446220 | 59194899 ~ 59273220 (-) | True | G1568035 |
| TU1794053 | lncRNA | downstream | 538692 | 59180098 ~ 59180748 (-) | True | G1568027 |
| TU1794519 | lncRNA | upstream | 19047 | 59757640 ~ 59760282 (-) | True | G1568438 |
| TU1794590 | lncRNA | upstream | 111036 | 59849629 ~ 59851133 (-) | True | G1568502 |
| TU1794593 | lncRNA | upstream | 114417 | 59853010 ~ 59853235 (-) | True | G1568505 |
| TU1794605 | lncRNA | upstream | 125345 | 59863938 ~ 59864236 (-) | True | G1568517 |
| TU1794612 | lncRNA | upstream | 131201 | 59869794 ~ 59870109 (-) | True | G1568524 |
| XM_021572654.2 | mRNA | downstream | 21276 | 59696846 ~ 59698164 (-) | True | LOC110496638 |
| XM_036953413.1 | mRNA | downstream | 23054 | 59647948 ~ 59696386 (-) | True | zgc:85777 |
| XR_002469581.2 | mRNA | downstream | 40416 | 59673674 ~ 59679024 (-) | True | LOC110496639 |
| XM_036953412.1 | mRNA | downstream | 194426 | 59501168 ~ 59525014 (-) | True | col1a2 |
| XR_005037524.1 | mRNA | downstream | 232153 | 59475047 ~ 59487287 (-) | True | casd1 |
| XM_036953419.1 | mRNA | upstream | 168313 | 59906906 ~ 59932090 (-) | False | LOC110496642 |
| LOC110496641 | mRNA | upstream | 280041 | 60018634 ~ 60200542 (-) | False | LOC110496641 |
| XM_036953421.1 | mRNA | upstream | 463355 | 60201948 ~ 60254722 (-) | False | LOC110496644 |
| XM_036953420.1 | mRNA | upstream | 463355 | 60201948 ~ 60254724 (-) | True | LOC110496644 |
| XR_002469584.2 | mRNA | upstream | 633925 | 60372518 ~ 60374869 (-) | False | LOC110496648 |
| TU1794038 | other | downstream | 562396 | 59155028 ~ 59157044 (-) | True | G1568017 |
| TU1793943 | other | downstream | 644792 | 59004845 ~ 59074648 (-) | True | G1567931 |
| TU1793867 | other | downstream | 845749 | 58870937 ~ 58873691 (-) | False | G1567871 |
| TU1793871 | other | downstream | 849433 | 58869363 ~ 58870007 (-) | True | G1567875 |
| TU1792861 | other | downstream | 1308311 | 58410499 ~ 58411129 (-) | True | G1567080 |
| TU1795401 | other | upstream | 503338 | 60241931 ~ 60251369 (-) | True | G1569198 |
| TU1795466 | other | upstream | 610183 | 60348776 ~ 60350759 (-) | True | G1569258 |
| TU1795498 | other | upstream | 641260 | 60379853 ~ 60389092 (-) | True | G1569277 |
| TU1795654 | other | upstream | 871894 | 60610487 ~ 60616016 (-) | False | LOC110496651 |
| TU1795648 | other | upstream | 873199 | 60611792 ~ 60616292 (-) | False | LOC110496651 |
