RNA id: TU1795654



Basic Information


Item Value
RNA id TU1795654
length 367
RNA type TUCP
GC content 0.45
exon number 4
gene id LOC110496651
representative False

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 60610487 ~ 60642154 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tacatggagtaccagtaccatatacagggagtaccatatacagggagtaccagaaccatatacagggagtaccatgtacatggagtaccagtaccatatacagggagtaccagtaccatatacagggagtaccatatacagggagtaccataaacagggagtaccagtaccatatacagggagtaccatatacagggagtaccagaaccatatacagggagtaccatatacagggagtaccagtaccatatacagggagtaccagtaccatatacagggagtaccagtaccatatacagggagtaccagtagcatatacagggagtaccagtaccatatacagggagtaccagtagcatatacaggg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1795571 lncRNA downstream 127407 60481739 ~ 60483080 (-) True G1569338
TU1795566 lncRNA downstream 135369 60474755 ~ 60475118 (-) True G1569333
TU1795543 lncRNA downstream 159042 60450629 ~ 60451445 (-) True G1569314
TU1795542 lncRNA downstream 162628 60445785 ~ 60447859 (-) True G1569313
TU1795540 lncRNA downstream 167502 60442660 ~ 60442985 (-) True G1569312
TU1795661 lncRNA upstream 9764 60625780 ~ 60631951 (-) True G1569410
TU1795682 lncRNA upstream 109393 60725409 ~ 60728216 (-) True G1569430
TU1795726 lncRNA upstream 124223 60740239 ~ 60741809 (-) True G1569467
TU1795725 lncRNA upstream 126030 60742046 ~ 60743190 (-) True G1569466
TU1795724 lncRNA upstream 127329 60743345 ~ 60744221 (-) True G1569465
XM_036953429.1 mRNA downstream 6569 60425049 ~ 60603918 (-) False LOC110496650
XM_036953432.1 mRNA downstream 6569 60425049 ~ 60603918 (-) False LOC110496650
XM_036953433.1 mRNA downstream 6569 60425049 ~ 60603918 (-) False LOC110496650
XM_036953435.1 mRNA downstream 6569 60425049 ~ 60603918 (-) True LOC110496650
XM_036953431.1 mRNA downstream 6571 60425049 ~ 60603916 (-) False LOC110496650
LOC110496651 mRNA upstream 240 60616256 ~ 60642154 (-) False LOC110496651
XM_021572670.2 mRNA upstream 29594 60645610 ~ 60670570 (-) True c18h18orf21
XM_036953440.1 mRNA upstream 651265 61267281 ~ 61323861 (-) False elp2
XM_036953441.1 mRNA upstream 654767 61270783 ~ 61323861 (-) False elp2
XM_021572676.2 mRNA upstream 863012 61479028 ~ 61493313 (-) True LOC110496657
TU1795498 other downstream 221395 60379853 ~ 60389092 (-) True G1569277
TU1795466 other downstream 259728 60348776 ~ 60350759 (-) True G1569258
TU1795401 other downstream 359118 60241931 ~ 60251369 (-) True G1569198
TU1794475 other downstream 873707 59729179 ~ 59736780 (-) True LOC110496637
TU1794038 other downstream 1453443 59155028 ~ 59157044 (-) True G1568017
TU1795693 other upstream 77362 60693378 ~ 60694099 (-) True G1569439
TU1796851 other upstream 675288 61291304 ~ 61293151 (-) True G1570468
TU1796842 other upstream 693791 61309807 ~ 61323821 (-) True elp2
TU1797091 other upstream 1049312 61665328 ~ 61665910 (-) True G1570695
TU1799050 other upstream 2819782 63435798 ~ 63491169 (-) True G1572487

Expression Profile