RNA id: trnay-gua-20


Basic Information

Item Value
RNA id trnay-gua-20
length 73
RNA type mRNA
GC content 0.53
exon number 2
gene id trnay-gua-20
representative True

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 67828465 ~ 67828552 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ctttcgatagctcagttggtagagcggaggactgtagatccttaggtcgctggttcaattCCAGCTCGAAGGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1803769 lncRNA downstream 20956 67807223 ~ 67807509 (-) True G1576428
TU1803768 lncRNA downstream 22834 67802327 ~ 67805631 (-) True G1576427
TU1803765 lncRNA downstream 27034 67801173 ~ 67801431 (-) True G1576424
TU1803763 lncRNA downstream 27855 67800324 ~ 67800610 (-) True G1576422
TU1803761 lncRNA downstream 34411 67793717 ~ 67794054 (-) True G1576420
TU1803783 lncRNA upstream 31842 67860394 ~ 67861022 (-) True G1576441
TU1803784 lncRNA upstream 32921 67861473 ~ 67861687 (-) True G1576442
TU1803786 lncRNA upstream 51068 67879620 ~ 67879854 (-) True G1576444
TU1803830 lncRNA upstream 67431 67895983 ~ 67896622 (-) True G1576482
TU1803846 lncRNA upstream 87905 67916457 ~ 67916842 (-) True G1576493
trnay-gua-19 mRNA downstream 804 67827574 ~ 67827661 (-) True trnay-gua-19
trnay-gua-18 mRNA downstream 2278 67826100 ~ 67826187 (-) True trnay-gua-18
trnay-gua-17 mRNA downstream 3750 67824628 ~ 67824715 (-) True trnay-gua-17
trnay-gua-16 mRNA downstream 5222 67823156 ~ 67823243 (-) True trnay-gua-16
trnay-gua-15 mRNA downstream 6695 67821683 ~ 67821770 (-) True trnay-gua-15
trnay-gua-21 mRNA upstream 1385 67829937 ~ 67830024 (-) True trnay-gua-21
trnay-gua-22 mRNA upstream 2859 67831411 ~ 67831498 (-) True trnay-gua-22
trnay-gua-23 mRNA upstream 3750 67832302 ~ 67832389 (-) True trnay-gua-23
trnay-gua-24 mRNA upstream 5222 67833774 ~ 67833861 (-) True trnay-gua-24
trnay-gua-25 mRNA upstream 6696 67835248 ~ 67835335 (-) True trnay-gua-25
TU1803506 other downstream 386489 67401448 ~ 67441976 (-) False G1576222
TU1803513 other downstream 386489 67401448 ~ 67441976 (-) False G1576222
TU1803517 other downstream 386489 67401448 ~ 67441976 (-) True G1576222
TU1803205 other downstream 624978 67203201 ~ 67203487 (-) True G1575977
TU1803115 other downstream 769792 67058177 ~ 67058673 (-) True LOC118941008
TU1803844 other upstream 86636 67915188 ~ 67955212 (-) True G1576491
TU1804691 other upstream 793696 68622248 ~ 68626119 (-) True LOC118941211
TU1805395 other upstream 920060 68748612 ~ 68787686 (-) True G1577745
TU1805790 other upstream 1484334 69312886 ~ 69315007 (-) False G1577996
TU1805792 other upstream 1484334 69312886 ~ 69315007 (-) False G1577996