RNA id: TU1726125


Basic Information

Item Value
RNA id TU1726125
length 406
RNA type TUCP
GC content 0.46
exon number 3
gene id G1509068
representative True

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 606622 ~ 607207 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GTGTTCTCCTATATGAGTCTTCTCTACCAGGTGTTCTCCTATATGAGTCCTCTCTACCAGGTGTTCTCCTATATGAGTCCTCTCTACCAGGTGTTCTCCTATATGAGTCCTCTCTACCAGGTGTTCTCCTATATGAGTCCTCTCTACCAGGTGTTCTCCTATATGAGTCCTCTCCACCAGGTGTTCTCCTATATGAGTCCTCTCCACCAGGTGTTCTCCTATATGAGTCTTCTCCACCAGGTGTTCTCCTATATGAGTCTTCTCTACCAGGTGTTCTCCTATATGAGTCTTCTCCACCAGGTGTTCTCCTATATGAGTCCTCTCTACCAGGTGTTCTCCTATATGAGTCCTCTCTACCAGGTGTTCTCCTATATGAGTCTTCTCTACCAGGTGTTCTCCTATATGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1726122 lncRNA upstream 5290 600592 ~ 601332 (+) True G1509067
TU1726119 lncRNA upstream 24537 581568 ~ 582085 (+) True G1509065
TU1726114 lncRNA upstream 30476 575615 ~ 576146 (+) True G1509061
TU1726113 lncRNA upstream 37383 568725 ~ 569239 (+) True G1509060
TU1726107 lncRNA upstream 57624 544894 ~ 548998 (+) True G1509056
TU1726126 lncRNA downstream 6954 614161 ~ 614700 (+) True G1509069
TU1726115 lncRNA downstream 9191 616398 ~ 621277 (+) True LOC110515393
TU1726127 lncRNA downstream 11005 618212 ~ 618626 (+) False G1509070
TU1726128 lncRNA downstream 11005 618212 ~ 618626 (+) True G1509070
TU1726281 lncRNA downstream 24223 631430 ~ 631687 (+) True G1509175
XM_036951452.1 mRNA upstream 36493 554930 ~ 570129 (+) False LOC110515805
XM_036951463.1 mRNA downstream 167643 774850 ~ 784873 (+) True LOC118941073
XM_036951464.1 mRNA downstream 182579 789786 ~ 792686 (+) False LOC110495331
LOC118941054 mRNA downstream 247163 854370 ~ 859799 (+) True LOC118941054
XM_036951393.1 mRNA downstream 1124017 1731224 ~ 1732090 (+) True LOC118941055
XM_036951475.1 mRNA downstream 1770726 2377933 ~ 2434726 (+) False tdrd3
TU1726118 other upstream 8525 589899 ~ 598097 (+) False LOC110515393
TU1726040 other upstream 161745 442803 ~ 444877 (+) False G1509015
TU1726336 other downstream 173582 780789 ~ 781203 (+) True G1509212
TU1726988 other downstream 780824 1388031 ~ 1389178 (+) True G1509697
TU1727296 other downstream 1075085 1682292 ~ 1682858 (+) True G1509914
TU1727592 other downstream 1770870 2378077 ~ 2400927 (+) False tdrd3
TU1727593 other downstream 1772428 2379635 ~ 2400927 (+) True tdrd3

Expression Profile