RNA id: TU1726336


Basic Information

Item Value
RNA id TU1726336
length 319
RNA type TUCP
GC content 0.55
exon number 2
gene id G1509212
representative True

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 780789 ~ 781203 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TCTGGAGTGGTTTCAGCTGGGATGGTAGTGGACGACTGGGTGGAATGTTCTGGAGTGGTTTCAGCTGGGATGGTAGTGGACGACTGGGTGGAATGTTCTGGAGTGGTTTCAGCTGGGATGGTAGTGGACGACTGGGTGGAATGTTCTGGAGTGGTTTCAGCTGGGAGGGTAGTGGACGACTGGGTGGAATGTTCTGGAGTGGTTTCAGCTGGGAGGGTAGTGGACGACTGGGTGGAATGTTCTGGAGTGGTTTCAGCTGGGATGGTAGTGGACGACTGGGTGGAATGTTCTGGAGTGGTTTCAGCTGGGATGGTAGTGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1726328 lncRNA upstream 9775 770782 ~ 771014 (+) True G1509207
TU1726326 lncRNA upstream 12764 767821 ~ 768025 (+) True G1509205
TU1726302 lncRNA upstream 65273 712117 ~ 715516 (+) False G1509188
TU1726303 lncRNA upstream 65273 712117 ~ 715516 (+) True G1509188
TU1726281 lncRNA upstream 149102 631430 ~ 631687 (+) True G1509175
TU1726341 lncRNA downstream 8475 789678 ~ 789878 (+) True LOC110495331
TU1726342 lncRNA downstream 11848 793051 ~ 793482 (+) True G1509218
TU1726345 lncRNA downstream 14669 795872 ~ 796361 (+) True G1509221
TU1726346 lncRNA downstream 19171 800374 ~ 800659 (+) True G1509222
TU1726347 lncRNA downstream 19739 800942 ~ 801238 (+) True G1509223
XM_036951457.1 mRNA upstream 159350 589742 ~ 621439 (+) False LOC110515393
XM_036951458.1 mRNA upstream 159350 589742 ~ 621439 (+) False LOC110515393
XM_036951459.1 mRNA upstream 159350 589742 ~ 621439 (+) False LOC110515393
XM_036951460.1 mRNA upstream 159350 589742 ~ 621439 (+) False LOC110515393
XM_036951461.1 mRNA upstream 159350 589742 ~ 621439 (+) False LOC110515393
XM_036951464.1 mRNA downstream 8583 789786 ~ 792686 (+) False LOC110495331
LOC118941054 mRNA downstream 73167 854370 ~ 859799 (+) True LOC118941054
XM_036951393.1 mRNA downstream 950021 1731224 ~ 1732090 (+) True LOC118941055
XM_036951475.1 mRNA downstream 1596730 2377933 ~ 2434726 (+) False tdrd3
XM_036951473.1 mRNA downstream 1596730 2377933 ~ 2435950 (+) False tdrd3
TU1726124 other upstream 173582 606622 ~ 607207 (+) False G1509068
TU1726125 other upstream 173582 606622 ~ 607207 (+) True G1509068
TU1726118 other upstream 182692 589899 ~ 598097 (+) False LOC110515393
TU1726040 other upstream 335912 442803 ~ 444877 (+) False G1509015
TU1726988 other downstream 606828 1388031 ~ 1389178 (+) True G1509697
TU1727296 other downstream 901089 1682292 ~ 1682858 (+) True G1509914
TU1727592 other downstream 1596874 2378077 ~ 2400927 (+) False tdrd3
TU1727593 other downstream 1598432 2379635 ~ 2400927 (+) True tdrd3
TU1727953 other downstream 1753109 2534312 ~ 2534675 (+) True G1510408

Expression Profile