RNA id: TU1732350


Basic Information

Item Value
RNA id TU1732350
length 314
RNA type TUCP
GC content 0.56
exon number 2
gene id G1513874
representative True

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 7426583 ~ 7426971 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ctcctctgtcctctctgggatgttcccttcctcttctcctctcctccgtcctctctgggatgttccctttctcttctcctctcctccgtcctctctgggatgttcccttcctcttctcctctcctccgtcctctctgggatgttcccttcctcttctcctgtcctctctgggatgttcccttcctcttctcctctcctctgtcctctctgggatgttcccttcctcttctcctctcctccgtcctctctgggatgttcccttcctcttctcctctcctccgtcatcTCCGGGATGttccctttctcttctcctc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1732347 lncRNA upstream 5001 7420066 ~ 7421582 (+) True G1513871
TU1732346 lncRNA upstream 6906 7419300 ~ 7419677 (+) True G1513870
TU1732342 lncRNA upstream 35674 7390596 ~ 7390909 (+) True G1513866
TU1731886 lncRNA upstream 70680 7225006 ~ 7355903 (+) True G1513515
TU1731888 lncRNA upstream 198122 7227121 ~ 7228461 (+) True G1513517
TU1732351 lncRNA downstream 3628 7430599 ~ 7430963 (+) True G1513875
TU1732331 lncRNA downstream 18820 7445791 ~ 7448743 (+) True LOC110495412
TU1732360 lncRNA downstream 29276 7456247 ~ 7457031 (+) True G1513880
TU1732367 lncRNA downstream 53438 7480409 ~ 7480762 (+) True G1513887
TU1732369 lncRNA downstream 63650 7490621 ~ 7491244 (+) True G1513889
XM_036951562.1 mRNA upstream 19698 7381975 ~ 7406885 (+) False LOC110496985
XM_036951563.1 mRNA upstream 19698 7381975 ~ 7406885 (+) True LOC110496985
XM_036951559.1 mRNA upstream 87137 7320493 ~ 7339446 (+) True LOC110500299
XM_036951525.1 mRNA upstream 324344 7032578 ~ 7102239 (+) False LOC110513752
XM_036951526.1 mRNA upstream 324344 7032578 ~ 7102239 (+) False LOC110513752
XM_036951572.1 mRNA downstream 4851 7431822 ~ 7446743 (+) False LOC110495412
XM_036951568.1 mRNA downstream 4851 7431822 ~ 7448417 (+) False LOC110495412
XM_036951569.1 mRNA downstream 4851 7431822 ~ 7448417 (+) False LOC110495412
XM_036951571.1 mRNA downstream 4851 7431822 ~ 7448417 (+) False LOC110495412
XM_036951573.1 mRNA downstream 87597 7514568 ~ 7532019 (+) False LOC110495411
TU1731797 other upstream 329423 7088832 ~ 7097160 (+) True LOC110513752
TU1731799 other upstream 340864 7032610 ~ 7085719 (+) False LOC110513752
TU1731792 other upstream 399773 7026208 ~ 7026810 (+) True G1513452
TU1731618 other upstream 716535 6708659 ~ 6710048 (+) True LOC110516612
TU1731526 other upstream 856104 6550645 ~ 6570479 (+) True LOC110514219
TU1732416 other downstream 193325 7620296 ~ 7621941 (+) True G1513922
TU1732464 other downstream 331777 7758748 ~ 7760971 (+) False LOC110511355
TU1732457 other downstream 367299 7794270 ~ 7801058 (+) True LOC110511355
TU1732572 other downstream 586889 8013860 ~ 8015030 (+) True G1514045
TU1732800 other downstream 920256 8347227 ~ 8412799 (+) True G1514180

Expression Profile