RNA id: TU1734759


Basic Information

Item Value
RNA id TU1734759
length 511
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G1515632
representative True

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 9721764 ~ 9722274 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

aaattaagtcttctctctgaacctctgctgtaaatagttaaatgaagtcttctctctgaacctctgctgtaaatagtcaaattaagtcttctctctgaacctctgctgtaaatagtcaaatgaagtcttctctctgaacctctgctgtaaatagtcaaatgaagtcttctctctgaacctctgctgtaaataatcaaattaagtcttctctctgaacctctgctgtaaataatcaaatgaagtcttctctctgaacctctgctgtaaataatcaaatgaagtcttctctctgaacctctgctgtaaatagttaaatgaagtcttctctctgaacctctgctgtaaatagtcaaatgaagtcttctctctgaacctctgctgtaaatagtcaaatgaagtcttctctctgaacctctgctgtaaatagtcaaatgaagtcttctctctgaacctctgctgtaaatagtcaaattaagtcttctctctgaacctctgctgtaaatagttaaat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1734746 lncRNA downstream 9035 9712403 ~ 9712729 (-) True G1515620
TU1734744 lncRNA downstream 12184 9709348 ~ 9709580 (-) True G1515618
TU1734735 lncRNA downstream 23395 9698170 ~ 9698369 (-) True G1515610
TU1734734 lncRNA downstream 23939 9696271 ~ 9697825 (-) True G1515609
TU1734730 lncRNA downstream 28494 9693019 ~ 9693270 (-) True G1515605
TU1735066 lncRNA upstream 25464 9747738 ~ 9748404 (-) True G1515875
TU1735113 lncRNA upstream 94532 9816806 ~ 9826743 (-) True G1515904
TU1735120 lncRNA upstream 115403 9837677 ~ 9837914 (-) True G1515911
TU1735146 lncRNA upstream 147376 9869650 ~ 9869889 (-) True G1515932
TU1735151 lncRNA upstream 159512 9881786 ~ 9882092 (-) True G1515937
XM_036951746.1 mRNA downstream 33031 9586941 ~ 9688733 (-) True LOC110496916
XM_036951745.1 mRNA downstream 33032 9586941 ~ 9688732 (-) False LOC110496916
XM_036951735.1 mRNA downstream 151189 9551258 ~ 9570575 (-) True LOC110497032
XM_036951744.1 mRNA downstream 193461 9526170 ~ 9528303 (-) True LOC110495573
XM_036951743.1 mRNA downstream 195785 9520263 ~ 9525979 (-) True LOC110497029
XM_036951755.1 mRNA upstream 45347 9767621 ~ 9785105 (-) False LOC110527257
XM_036951753.1 mRNA upstream 45347 9767621 ~ 9785106 (-) False LOC110527257
XM_036951752.1 mRNA upstream 45347 9767621 ~ 9785107 (-) False LOC110527257
XM_036951754.1 mRNA upstream 45347 9767621 ~ 9785107 (-) True LOC110527257
XM_021596447.2 mRNA upstream 105967 9828241 ~ 9829247 (-) True LOC110519295
TU1734564 other downstream 227882 9488570 ~ 9493882 (-) True LOC110495556
TU1734538 other downstream 242546 9478676 ~ 9479218 (-) True G1515456
TU1734435 other downstream 298183 9422569 ~ 9423581 (-) True LOC110495568
TU1734456 other downstream 328156 9392696 ~ 9393608 (-) True LOC118941087
TU1734207 other downstream 567972 9140546 ~ 9153792 (-) True LOC110496958
TU1735073 other upstream 39199 9761473 ~ 9765225 (-) True G1515880
TU1735278 other upstream 452585 10174859 ~ 10195515 (-) True LOC110516308
TU1735300 other upstream 488044 10210318 ~ 10210833 (-) True G1516062
TU1735349 other upstream 536551 10258825 ~ 10259992 (-) False G1516107
TU1735899 other upstream 1131295 10853569 ~ 10856314 (-) True G1516562

Expression Profile