RNA id: TU1735349



Basic Information


Item Value
RNA id TU1735349
length 376
RNA type TUCP
GC content 0.46
exon number 4
gene id G1516107
representative False

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10258825 ~ 10260556 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


AAGGTAGGAATGGAAGAGGATCAAGGCAGTGTAAAGGTAGGAATGGAAGAGGATCAAGGCAATGTAAAGGTAGGAATGGAAGAGGATCAAGGCAATGTAAAGGTAGGAATGGAAGAGGATCAAGGCAGTGTACAGGTAGGAATGGAAGAGGATCAAGGCAGTGTAAAGGTAGAAATGGAAGAGGATCAAGGCAGTGTAAAGGTAGGAATGGAAGAGGATCAAGGCAGTGTAAAGGTAGGAATGGAAGGGGATCAAGGCAGTGTAAAGGTAGGAATGGAAGAGGATCAAGGCAGTGTAAAGGTAGGAATGGAAGAGGATCAAGGCAGTGTACAGGTAGGAATGGAGGGGGATCAAGGCAGTGTAAAGGTAGGAATGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1735335 lncRNA downstream 6230 10252294 ~ 10252595 (-) True G1516096
TU1735319 lncRNA downstream 19404 10238410 ~ 10239421 (-) True G1516080
TU1735315 lncRNA downstream 25209 10233390 ~ 10233616 (-) True G1516076
TU1735309 lncRNA downstream 34470 10224138 ~ 10224355 (-) True G1516070
TU1735306 lncRNA downstream 39903 10218722 ~ 10218922 (-) True G1516068
TU1735358 lncRNA upstream 14124 10274116 ~ 10274351 (-) True G1516116
TU1735359 lncRNA upstream 16593 10276585 ~ 10276791 (-) True G1516117
TU1735362 lncRNA upstream 20924 10280916 ~ 10281445 (-) True G1516120
TU1735363 lncRNA upstream 23028 10283020 ~ 10283365 (-) True G1516121
TU1735406 lncRNA upstream 76806 10336798 ~ 10337028 (-) True G1516146
XM_036951774.1 mRNA downstream 28944 10175491 ~ 10229881 (-) False LOC110516308
XM_036951772.1 mRNA downstream 100319 10149011 ~ 10158506 (-) False LOC110495586
XM_036951770.1 mRNA downstream 100320 10149011 ~ 10158505 (-) False LOC110495586
XM_036951771.1 mRNA downstream 100320 10149011 ~ 10158505 (-) False LOC110495586
XR_005037367.1 mRNA downstream 111980 10138344 ~ 10146845 (-) True LOC110497041
XM_036951776.1 mRNA upstream 114779 10374771 ~ 10387072 (-) False LOC110527275
XM_036951777.1 mRNA upstream 114779 10374771 ~ 10387073 (-) True LOC110527275
XR_005037370.1 mRNA upstream 928800 11188792 ~ 11194773 (-) False LOC118941093
XM_036951794.1 mRNA upstream 936105 11196097 ~ 11204430 (-) True LOC110495606
XM_036951408.1 mRNA upstream 951327 11211319 ~ 11212299 (-) True LOC110527288
TU1735300 other downstream 47992 10210318 ~ 10210833 (-) True G1516062
TU1735278 other downstream 63310 10174859 ~ 10195515 (-) True LOC110516308
TU1735073 other downstream 493600 9761473 ~ 9765225 (-) True G1515880
TU1734564 other downstream 764943 9488570 ~ 9493882 (-) True LOC110495556
TU1734538 other downstream 779607 9478676 ~ 9479218 (-) True G1515456
TU1735899 other upstream 593577 10853569 ~ 10856314 (-) True G1516562
TU1736140 other upstream 788413 11048405 ~ 11048928 (-) True G1516757
TU1736155 other upstream 829237 11089229 ~ 11092444 (-) True G1516771
TU1736174 other upstream 907629 11167621 ~ 11174483 (-) False G1516784
TU1737190 other upstream 1349044 11609036 ~ 11745913 (-) True LOC110528752

Expression Profile