RNA id: TU1735759



Basic Information


Item Value
RNA id TU1735759
length 201
lncRNA type intronic
GC content 0.40
exon number 1
gene id G1516435
representative True

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10695518 ~ 10695718 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cctttgggtctagctgcctcctatttattaatgagactagtttcctttgggaccagctgcctcctatttattaatgagactagtttcctttgggtctagctgcctcctatttattaatgagactagtttcctttgagactagctgcctcctatttattaatgagactagtttcctttgggacaagctgcctcctatttatt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1735757 lncRNA upstream 203 10694511 ~ 10695315 (+) True G1516433
TU1735756 lncRNA upstream 1156 10693970 ~ 10694362 (+) True G1516432
TU1735755 lncRNA upstream 2193 10693104 ~ 10693325 (+) True G1516431
TU1735754 lncRNA upstream 2419 10692874 ~ 10693099 (+) True G1516430
TU1735750 lncRNA upstream 5894 10689395 ~ 10689624 (+) True G1516426
TU1735769 lncRNA downstream 9300 10705018 ~ 10705261 (+) True G1516443
TU1735773 lncRNA downstream 14313 10710031 ~ 10786184 (+) True G1516446
TU1735834 lncRNA downstream 136826 10832544 ~ 10833073 (+) True G1516499
TU1735837 lncRNA downstream 141200 10836918 ~ 10837240 (+) True G1516502
TU1735780 lncRNA downstream 163619 10859337 ~ 10859833 (+) False LOC118941090
XM_036951775.1 mRNA upstream 326940 10362570 ~ 10368578 (+) True LOC118941089
XM_036951773.1 mRNA upstream 546389 10146949 ~ 10149129 (+) True LOC118941088
XM_036951768.1 mRNA upstream 561390 10131530 ~ 10134128 (+) True LOC110495585
XM_036951407.1 mRNA upstream 573708 10118660 ~ 10121810 (+) True LOC118941061
XM_036951759.1 mRNA upstream 802283 9887375 ~ 9893235 (+) True LOC110495584
XR_005037368.1 mRNA downstream 160651 10856369 ~ 10862119 (+) False LOC118941090
XM_036951779.1 mRNA downstream 248685 10944403 ~ 10956829 (+) False LOC110527277
XM_036951780.1 mRNA downstream 248819 10944537 ~ 10956829 (+) True LOC110527277
XM_036951781.1 mRNA downstream 265026 10960744 ~ 10967479 (+) False LOC118936256
XM_036951782.1 mRNA downstream 265353 10961071 ~ 10967470 (+) True LOC118936256
TU1735389 other upstream 368380 10319310 ~ 10327138 (+) True G1516136
TU1735043 other upstream 523562 10170102 ~ 10171956 (+) True G1515853
TU1734946 other upstream 720212 9974528 ~ 9975306 (+) True G1515776
TU1733898 other upstream 1692392 9000398 ~ 9003126 (+) True G1515005
TU1732757 other upstream 2015308 8678448 ~ 8680210 (+) True LOC110495395
TU1735992 other downstream 321047 11016765 ~ 11017089 (+) True G1516637
TU1735957 other downstream 390367 11086085 ~ 11092554 (+) True LOC118941092
TU1736485 other downstream 937349 11633067 ~ 11634979 (+) True G1517015
TU1736489 other downstream 947071 11642789 ~ 11643758 (+) True G1517019
TU1736637 other downstream 1244344 11940062 ~ 11941105 (+) False G1517150

Expression Profile