RNA id: TU1737755



Basic Information


Item Value
RNA id TU1737755
length 226
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G1517998
representative True

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12536359 ~ 12536584 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggtgtagtgtactgaagaggagtgtaccaggtgtagtgtactagagaggagtgtaccaggtgtagtgtactggagaggagtgtaccaggtgtagtgtactggaGAGGAGTGTACCAGATGTAGTGTACTAGAGAGGAGTGcaccaggtgtagtgtactggagaggagtgtaccaggtgtagtgtactggaGAGGAGTGTACCAGGTATAGTGTACCAGGTGTAGTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1737741 lncRNA downstream 36554 12499046 ~ 12499805 (-) True G1517987
TU1737722 lncRNA downstream 90833 12445290 ~ 12445526 (-) True G1517970
TU1737717 lncRNA downstream 100392 12435606 ~ 12435967 (-) True G1517965
TU1737715 lncRNA downstream 102424 12433714 ~ 12433935 (-) True G1517963
TU1737707 lncRNA downstream 121268 12413632 ~ 12415091 (-) False G1517955
TU1737756 lncRNA upstream 1451 12538035 ~ 12538263 (-) True G1517999
TU1737757 lncRNA upstream 5670 12542254 ~ 12549990 (-) True G1518000
TU1737735 lncRNA upstream 17686 12554270 ~ 12555049 (-) True G1517981
TU1737749 lncRNA upstream 26231 12562815 ~ 12566021 (-) True G1517994
TU1737764 lncRNA upstream 34919 12571503 ~ 12583644 (-) True LOC118941039
XM_036951293.1 mRNA downstream 29633 12470084 ~ 12506726 (-) False LOC110528732
XM_036951294.1 mRNA downstream 29633 12470084 ~ 12506726 (-) False LOC110528732
XM_036951295.1 mRNA downstream 29633 12470084 ~ 12506726 (-) False LOC110528732
XM_036951296.1 mRNA downstream 29633 12470084 ~ 12506726 (-) False LOC110528732
XM_036951297.1 mRNA downstream 29633 12470084 ~ 12506726 (-) True LOC110528732
XM_021608380.2 mRNA upstream 16084 12552668 ~ 12553871 (-) True LOC110527216
XR_005037324.1 mRNA upstream 35138 12571722 ~ 12572389 (-) False LOC118941039
XM_021570828.2 mRNA upstream 75430 12612014 ~ 12616159 (-) True LOC110495529
XM_036951372.1 mRNA upstream 129262 12665846 ~ 12677668 (-) True LOC118941036
XM_036951370.1 mRNA upstream 146525 12683109 ~ 12695620 (-) True LOC110527208
TU1737645 other downstream 250727 12285078 ~ 12285632 (-) True G1517902
TU1737633 other downstream 273290 12260792 ~ 12263069 (-) True LOC110495544
TU1737601 other downstream 290616 12240234 ~ 12245743 (-) False LOC110512633
TU1737603 other downstream 290616 12240234 ~ 12245743 (-) True LOC110512633
TU1737536 other downstream 513919 12020772 ~ 12022440 (-) False G1517822
TU1737778 other upstream 47144 12583728 ~ 12600331 (-) False G1518019
TU1737781 other upstream 47144 12583728 ~ 12600331 (-) False G1518019
TU1737782 other upstream 47144 12583728 ~ 12600331 (-) True G1518019
TU1737893 other upstream 369627 12906211 ~ 12910842 (-) True LOC110495512
TU1737891 other upstream 435069 12971653 ~ 12976441 (-) True LOC110513917

Expression Profile