Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1745484 |
| length | 477 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 2 |
| gene id | G1524431 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 19027094 ~ 19028192 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1745482 | lncRNA | downstream | 8256 | 19018362 ~ 19018838 (-) | True | G1524429 |
| TU1745476 | lncRNA | downstream | 33334 | 18993464 ~ 18993760 (-) | True | G1524423 |
| TU1745475 | lncRNA | downstream | 35353 | 18991452 ~ 18991741 (-) | True | G1524422 |
| TU1745474 | lncRNA | downstream | 35863 | 18990970 ~ 18991231 (-) | True | G1524421 |
| TU1745471 | lncRNA | downstream | 44012 | 18980780 ~ 18983082 (-) | True | G1524418 |
| TU1745494 | lncRNA | upstream | 22873 | 19051065 ~ 19051825 (-) | True | G1524440 |
| TU1745495 | lncRNA | upstream | 23741 | 19051933 ~ 19052469 (-) | True | G1524441 |
| TU1745498 | lncRNA | upstream | 40462 | 19068654 ~ 19124540 (-) | True | G1524443 |
| TU1745514 | lncRNA | upstream | 70260 | 19098452 ~ 19140101 (-) | True | G1524454 |
| TU1745542 | lncRNA | upstream | 135049 | 19163241 ~ 19233214 (-) | True | G1524480 |
| XM_036952162.1 | mRNA | downstream | 111406 | 18909006 ~ 18915688 (-) | True | crlf1a |
| XM_036952161.1 | mRNA | downstream | 111407 | 18909006 ~ 18915687 (-) | False | crlf1a |
| XM_036951416.1 | mRNA | downstream | 119136 | 18905515 ~ 18907958 (-) | True | LOC110497081 |
| XM_021571141.2 | mRNA | downstream | 124740 | 18898437 ~ 18902354 (-) | True | LOC110495741 |
| XM_036952159.1 | mRNA | downstream | 130816 | 18891721 ~ 18896278 (-) | True | LOC110495739 |
| XM_036952183.1 | mRNA | upstream | 159215 | 19187407 ~ 19195604 (-) | False | acvr1l |
| XM_036952182.1 | mRNA | upstream | 159215 | 19187407 ~ 19195633 (-) | False | acvr1l |
| XM_021571148.2 | mRNA | upstream | 159215 | 19187407 ~ 19200058 (-) | False | acvr1l |
| XM_021571150.2 | mRNA | upstream | 159215 | 19187407 ~ 19200059 (-) | True | acvr1l |
| XM_021571154.2 | mRNA | upstream | 294464 | 19322656 ~ 19339854 (-) | False | LOC110495751 |
| TU1745358 | other | downstream | 277699 | 18749125 ~ 18749395 (-) | True | G1524311 |
| TU1744093 | other | downstream | 459847 | 18561906 ~ 18567247 (-) | True | G1523241 |
| TU1744079 | other | downstream | 485383 | 18541145 ~ 18541711 (-) | True | G1523234 |
| TU1744124 | other | downstream | 580533 | 18445587 ~ 18446561 (-) | True | ghs-r |
| TU1743987 | other | downstream | 591042 | 18432093 ~ 18436052 (-) | True | G1523149 |
| TU1745534 | other | upstream | 115793 | 19143985 ~ 19164126 (-) | True | G1524473 |
| TU1745684 | other | upstream | 545436 | 19573628 ~ 19577100 (-) | True | LOC110495764 |
| TU1745849 | other | upstream | 694553 | 19722745 ~ 19730068 (-) | False | G1524755 |
| TU1745850 | other | upstream | 695242 | 19723434 ~ 19725531 (-) | True | G1524755 |
| TU1746271 | other | upstream | 1542904 | 20571096 ~ 20571867 (-) | True | LOC110497093 |
