RNA id: TU1745925



Basic Information


Item Value
RNA id TU1745925
length 214
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G1524820
representative True

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 19851074 ~ 19851287 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GGGAAAGTGAAAGTAAAGATTGATATTATCTAGGATCCCGAAACAAGCCTAACGGCATCACACAAGGCTAATCTCCGAATAAAAGGGCAGGATACATAACCAGGTCAGTCTGGACCGGACCTGTGAGTCACCTGTTAGCAGGGTGACATAAGAACTTGAGTGAGACGACTTGTATCACTCTTGACGGGGGTACCTTAACGGTCCTATAGCAAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1745891 lncRNA downstream 2235 19848369 ~ 19848839 (-) True G1524791
TU1745868 lncRNA downstream 105795 19742789 ~ 19745279 (-) True G1524769
TU1745839 lncRNA downstream 142920 19707684 ~ 19708154 (-) True G1524746
TU1745791 lncRNA downstream 182024 19667110 ~ 19669050 (-) True G1524702
TU1745767 lncRNA downstream 278545 19570743 ~ 19572529 (-) True G1524679
TU1745928 lncRNA upstream 2073 19853360 ~ 19853658 (-) True G1524823
TU1745929 lncRNA upstream 2633 19853920 ~ 19854200 (-) True G1524824
TU1745936 lncRNA upstream 14365 19865652 ~ 19865916 (-) True G1524831
TU1745949 lncRNA upstream 29327 19880614 ~ 19880863 (-) True G1524838
TU1745976 lncRNA upstream 66088 19917375 ~ 19917756 (-) True G1524860
XM_021571183.2 mRNA downstream 57620 19762474 ~ 19793454 (-) False LOC110495768
XM_021571184.2 mRNA downstream 57620 19762474 ~ 19793454 (-) True LOC110495768
XM_021571185.2 mRNA downstream 78596 19762474 ~ 19772478 (-) False LOC110495768
trnan-guu-14 mRNA downstream 174342 19676659 ~ 19676732 (-) True trnan-guu-14
XM_036952208.1 mRNA downstream 202323 19584834 ~ 19648751 (-) True LOC110497086
XM_036951384.1 mRNA upstream 8917 19860204 ~ 19864234 (-) True LOC118941046
XM_021571193.2 mRNA upstream 108193 19959480 ~ 19967828 (-) True LOC110495773
LOC110497091 mRNA upstream 199153 20050440 ~ 20058151 (-) False LOC110497091
XM_021571204.2 mRNA upstream 262019 20113306 ~ 20140842 (-) True LOC110495778
XM_021571211.2 mRNA upstream 327314 20178601 ~ 20190522 (-) False LOC110495781
TU1745849 other downstream 121006 19722745 ~ 19730068 (-) False G1524755
TU1745850 other downstream 125543 19723434 ~ 19725531 (-) True G1524755
TU1745684 other downstream 273974 19573628 ~ 19577100 (-) True LOC110495764
TU1745534 other downstream 686948 19143985 ~ 19164126 (-) True G1524473
TU1745358 other downstream 1101679 18749125 ~ 18749395 (-) True G1524311
TU1746271 other upstream 719809 20571096 ~ 20571867 (-) True LOC110497093
TU1748552 other upstream 2410769 22262056 ~ 22262462 (-) True G1527230
TU1749447 other upstream 3020758 22872045 ~ 22885833 (-) True G1528018
TU1750411 other upstream 3308271 23159558 ~ 23168591 (-) True LOC110495841
TU1750687 other upstream 3630253 23481540 ~ 23541256 (-) True LOC110495851

Expression Profile