RNA id: TU1750366



Basic Information


Item Value
RNA id TU1750366
length 348
lncRNA type antisense_over
GC content 0.51
exon number 1
gene id G1528808
representative True

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 24306261 ~ 24306608 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GCATCTTAAGTTAATAGTTTTTAATTAACAATCATTCGTTACTACATATTGACTAGTTGCTGGCTAGGGTACCTGATGCCTCCAACAGAGAGGTGTCCGTAGGAGCTGCTAGCTGCAGAGCTGGAGCGTGAGTTGTTGATGTAGGCCACCAGAGAGTTGGGCGAGGTACGGATCATGGTCTGCAGGTCGATGCTGGCGTCTGAGAGAGGCGAGATGGACAGGGCTCGCTTTCTGTTCAGCCTGGGGGTCAGTCTGGGACTGGGGAACCGTGACGCTGTGGAaaagaaaaacacacagacacatacagaccgTTAGTCTGACAACCTCTGAACTTCTCTCGGCTTCTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1750363 lncRNA upstream 2132 24303788 ~ 24304129 (+) True G1528805
TU1750361 lncRNA upstream 4823 24300892 ~ 24301438 (+) True G1528803
TU1750360 lncRNA upstream 9837 24296112 ~ 24296424 (+) True G1528802
TU1750357 lncRNA upstream 12822 24293175 ~ 24293439 (+) True G1528799
TU1750356 lncRNA upstream 13415 24292620 ~ 24292846 (+) True G1528798
TU1750376 lncRNA downstream 23679 24330287 ~ 24330521 (+) True G1528818
TU1750387 lncRNA downstream 50609 24357217 ~ 24357421 (+) True G1528829
TU1750391 lncRNA downstream 58649 24365257 ~ 24365530 (+) True G1528833
TU1750393 lncRNA downstream 61686 24368294 ~ 24368502 (+) True G1528835
TU1751263 lncRNA downstream 70508 24377116 ~ 24377335 (+) True G1529593
XM_036952395.1 mRNA upstream 43155 24222829 ~ 24263106 (+) False LOC110495884
XM_036951425.1 mRNA downstream 158930 24465538 ~ 24472111 (+) False LOC118941069
XM_036952400.1 mRNA downstream 165491 24472099 ~ 24477037 (+) False LOC110495888
XM_021571400.2 mRNA downstream 165569 24472177 ~ 24477037 (+) True LOC110495888
XM_036952401.1 mRNA downstream 214089 24520697 ~ 24525649 (+) False LOC110495887
XM_021571401.2 mRNA downstream 249629 24556237 ~ 24574771 (+) True LOC110495890
TU1749630 other upstream 1144970 23158833 ~ 23161291 (+) True G1528194
TU1748777 other upstream 1694809 22599413 ~ 22611452 (+) False LOC110497098
TU1748763 other upstream 1694809 22599497 ~ 22611452 (+) True LOC110497098
TU1746485 other upstream 3548849 20756691 ~ 20757412 (+) True G1525320
TU1745224 other upstream 3822548 20473360 ~ 20483713 (+) True G1524181
TU1751373 other downstream 214127 24520735 ~ 24522946 (+) False LOC110495887
TU1752092 other downstream 698153 25004761 ~ 25005609 (+) True G1530367
TU1752290 other downstream 842375 25148983 ~ 25149468 (+) False LOC110495895
TU1752288 other downstream 848125 25154733 ~ 25155895 (+) True LOC110495895
TU1752534 other downstream 1259863 25566471 ~ 25571346 (+) True G1530785

Expression Profile