RNA id: TU1752734



Basic Information


Item Value
RNA id TU1752734
length 235
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G1530973
representative True

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 25157900 ~ 25158134 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


acaatgagctgttgctatcgataaggtgtctgattcatcattttcacctcaaatagaagtagagggacttttgtcagaggttgcttgttgtgagcgctgagggaactttatgcacttagccagatgattctgcatctttgttgcattcttcacatatgatttgccatagtatttgcaaatgtacacagcttttccttctacattagctgcagtgaaatgtctccacacatcagat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1752733 lncRNA downstream 776 25156884 ~ 25157124 (-) True G1530972
TU1752732 lncRNA downstream 3049 25153570 ~ 25154851 (-) True G1530971
TU1752727 lncRNA downstream 8273 25148881 ~ 25149627 (-) True G1530966
TU1752726 lncRNA downstream 12310 25145206 ~ 25145590 (-) True G1530965
TU1752725 lncRNA downstream 12973 25144728 ~ 25144927 (-) True G1530964
TU1752737 lncRNA upstream 5697 25163831 ~ 25164035 (-) True G1530976
TU1752742 lncRNA upstream 14438 25172572 ~ 25172803 (-) True G1530981
TU1752798 lncRNA upstream 98866 25257000 ~ 25260403 (-) False LOC110495901
TU1752799 lncRNA upstream 98866 25257000 ~ 25257837 (-) True LOC110495901
TU1752810 lncRNA upstream 124512 25282646 ~ 25282850 (-) True G1531039
LOC110496921 mRNA downstream 153767 24987741 ~ 25004133 (-) True LOC110496921
XM_036952403.1 mRNA downstream 217978 24862973 ~ 24939922 (-) False LOC110495893
XM_036952404.1 mRNA downstream 217978 24862973 ~ 24939922 (-) False LOC110495893
XM_021571403.2 mRNA downstream 528588 24620677 ~ 24629312 (-) False LOC110495891
XM_021571411.2 mRNA upstream 21229 25179363 ~ 25196343 (-) False LOC110495898
XM_021571412.2 mRNA upstream 21229 25179363 ~ 25196343 (-) False LOC110495898
XM_021571413.2 mRNA upstream 21229 25179363 ~ 25196343 (-) False LOC110495898
XM_036952406.1 mRNA upstream 21229 25179363 ~ 25196343 (-) False LOC110495898
XM_021571415.2 mRNA upstream 25062 25183196 ~ 25196343 (-) True LOC110495898
TU1752728 other downstream 6906 25150068 ~ 25150994 (-) True G1530967
TU1751283 other downstream 764216 24393375 ~ 24393684 (-) True G1529613
TU1751211 other downstream 873906 24283591 ~ 24283994 (-) True LOC110497104
TU1751209 other downstream 877454 24279738 ~ 24280446 (-) False LOC110497104
TU1750685 other downstream 1614407 23542606 ~ 23543493 (-) True LOC110495852
TU1752921 other upstream 361287 25519421 ~ 25523180 (-) True G1531142
TU1752958 other upstream 415304 25573438 ~ 25573671 (-) True LOC110495915
TU1753025 other upstream 538405 25696539 ~ 25708874 (-) True G1531236
TU1755359 other upstream 2029488 27187622 ~ 27188230 (-) False G1533378
TU1755360 other upstream 2029488 27187622 ~ 27189549 (-) True G1533378

Expression Profile