RNA id: TU1753594



Basic Information


Item Value
RNA id TU1753594
length 207
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G1531762
representative True

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 26340094 ~ 26340300 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


AATTCTTACTGAGCCTCTATGAGACCTACATTTGAAAGTAGCATCAATCCATTAATGGGACGTTAATGTGTTTCTCATTTTCATAGAGGGGTTGGGGTAGACCAATGTGGAAAATCAGATATCGCCACCTTTAACTCCGACAGCGAATAGTCCGAGTTACATGTCTAGAAGCATAGTACGTATATTTAGCTATCCATCAATGAAATA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1753593 lncRNA upstream 1016 26338824 ~ 26339078 (+) True G1531761
TU1753408 lncRNA upstream 32980 26306898 ~ 26307114 (+) True G1531595
TU1753395 lncRNA upstream 69758 26268829 ~ 26270336 (+) True G1531582
TU1753253 lncRNA upstream 302929 26036891 ~ 26037165 (+) True G1531450
TU1753248 lncRNA upstream 308549 26030725 ~ 26031545 (+) True G1531446
TU1753722 lncRNA downstream 97951 26438251 ~ 26438530 (+) True G1531890
TU1753739 lncRNA downstream 107496 26447796 ~ 26448082 (+) True G1531907
TU1753740 lncRNA downstream 107801 26448101 ~ 26448513 (+) True G1531908
TU1753743 lncRNA downstream 108629 26448929 ~ 26449362 (+) True G1531911
TU1753781 lncRNA downstream 140047 26480347 ~ 26480564 (+) True G1531949
XM_021571450.2 mRNA upstream 72962 26253121 ~ 26267132 (+) False kynu
XR_002469489.2 mRNA upstream 72962 26253121 ~ 26267132 (+) True kynu
XM_021571451.2 mRNA upstream 75098 26253121 ~ 26264996 (+) False kynu
XR_002469490.2 mRNA upstream 75136 26253121 ~ 26264958 (+) False kynu
XM_021571447.2 mRNA upstream 366775 25961717 ~ 25973319 (+) True bzw1a
XM_036952438.1 mRNA downstream 642681 26982981 ~ 27032712 (+) False LOC110495930
XM_021571460.2 mRNA downstream 642687 26982987 ~ 27032712 (+) False LOC110495930
XM_021571458.2 mRNA downstream 642688 26982988 ~ 27032712 (+) False LOC110495930
XM_021571459.2 mRNA downstream 642695 26982995 ~ 27032712 (+) False LOC110495930
XM_036952437.1 mRNA downstream 672676 27012976 ~ 27032712 (+) False LOC110495930
TU1753187 other upstream 396416 25934180 ~ 25943678 (+) True LOC110496782
TU1753186 other upstream 405136 25934180 ~ 25934958 (+) False LOC110496782
TU1752680 other upstream 500359 25838506 ~ 25839735 (+) False G1530923
TU1752681 other upstream 500359 25838506 ~ 25839735 (+) False G1530923
TU1752534 other upstream 768748 25566471 ~ 25571346 (+) True G1530785
TU1754169 other downstream 417069 26757369 ~ 26757677 (+) True G1532307
TU1754835 other downstream 1296240 27636540 ~ 27651825 (+) True LOC110495947
TU1755008 other downstream 1606778 27947078 ~ 27950222 (+) True LOC110495958
TU1755074 other downstream 1634513 27974813 ~ 28038476 (+) True G1533121
TU1756511 other downstream 2392475 28732775 ~ 28735228 (+) False LOC110495972

Expression Profile