RNA id: TU1754187


Basic Information

Item Value
RNA id TU1754187
length 218
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G1532325
representative True

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 26768898 ~ 26769115 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaactgaaaatttgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgttgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgaattt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1754170 lncRNA downstream 12458 26756184 ~ 26756440 (-) True G1532308
TU1754158 lncRNA downstream 20307 26748373 ~ 26748591 (-) True G1532296
TU1754152 lncRNA downstream 26363 26742308 ~ 26742535 (-) True G1532290
TU1754142 lncRNA downstream 31841 26736836 ~ 26737057 (-) True G1532280
TU1754122 lncRNA downstream 45740 26722930 ~ 26723158 (-) True G1532260
TU1754236 lncRNA upstream 27359 26796474 ~ 26796693 (-) True G1532374
TU1754299 lncRNA upstream 71590 26840705 ~ 26841110 (-) True G1532436
TU1754331 lncRNA upstream 97706 26866821 ~ 26867112 (-) True G1532468
TU1754367 lncRNA upstream 123856 26892971 ~ 26893280 (-) True G1532504
TU1754368 lncRNA upstream 124300 26893415 ~ 26893662 (-) True G1532505
XM_036952430.1 mRNA downstream 176703 26513620 ~ 26592195 (-) False LOC110495928
XM_021571461.2 mRNA upstream 295914 27065029 ~ 27083077 (-) True LOC110495931
XM_021571463.2 mRNA upstream 327865 27096980 ~ 27140486 (-) False LOC110495932
XM_021571465.2 mRNA upstream 327865 27096980 ~ 27140486 (-) False LOC110495932
XM_021571462.2 mRNA upstream 327865 27096980 ~ 27140487 (-) False LOC110495932
XM_021571464.2 mRNA upstream 327865 27096980 ~ 27140487 (-) True LOC110495932
TU1753025 other downstream 1060024 25696539 ~ 25708874 (-) True G1531236
TU1752958 other downstream 1195227 25573438 ~ 25573671 (-) True LOC110495915
TU1752921 other downstream 1245718 25519421 ~ 25523180 (-) True G1531142
TU1752728 other downstream 1617904 25150068 ~ 25150994 (-) True G1530967
TU1751283 other downstream 2375214 24393375 ~ 24393684 (-) True G1529613
TU1755359 other upstream 418507 27187622 ~ 27188230 (-) False G1533378
TU1755360 other upstream 418507 27187622 ~ 27189549 (-) True G1533378
TU1755743 other upstream 985059 27754174 ~ 27798613 (-) True LOC110495948
TU1755806 other upstream 1091931 27861046 ~ 27914520 (-) True LOC110496785
TU1755852 other upstream 1265849 28034964 ~ 28036616 (-) False LOC110495955

Expression Profile