RNA id: TU1755259



Basic Information


Item Value
RNA id TU1755259
length 272
lncRNA type read_through
GC content 0.54
exon number 2
gene id G1533288
representative True

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 27035775 ~ 27115226 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


attgaaagcaacctgtcgggctgtatcaccgcctggtacagaaaatgcaccgccctcaaccgtaaggctctccagagggtggtgtggtctgcacaacacatcaccgggggcaaactatagcacccgatgtcacaggaagaccaaaaagatcatcaaggacaacaaccacccgagccactgcctgttcaccctgctacctgttcaccccgcttccatccagaatgcgaggtcagtacaggtgcatcaaagctgggaccgagagactgaaaaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1755203 lncRNA downstream 3073 27027800 ~ 27032702 (-) False G1533235
TU1755199 lncRNA downstream 3073 27029629 ~ 27032702 (-) False G1533235
TU1755205 lncRNA downstream 3073 27029629 ~ 27032702 (-) False G1533235
TU1755197 lncRNA downstream 3073 27029931 ~ 27032702 (-) False G1533235
TU1755206 lncRNA downstream 3073 27029931 ~ 27032702 (-) True G1533235
TU1755348 lncRNA upstream 55362 27170588 ~ 27171054 (-) True G1533367
TU1755362 lncRNA upstream 74396 27189622 ~ 27189973 (-) True G1533380
TU1755365 lncRNA upstream 77932 27193158 ~ 27193378 (-) True G1533383
TU1755369 lncRNA upstream 80609 27195835 ~ 27196116 (-) True G1533387
TU1755370 lncRNA upstream 81377 27196603 ~ 27205369 (-) False G1533388
XM_036952430.1 mRNA downstream 443580 26513620 ~ 26592195 (-) False LOC110495928
XM_021571466.2 mRNA upstream 36969 27152195 ~ 27156287 (-) True LOC110495934
XM_021571467.2 mRNA upstream 43752 27158978 ~ 27185448 (-) True LOC110495935
XM_021571469.2 mRNA upstream 99840 27215066 ~ 27219473 (-) True LOC110495936
XM_036952443.1 mRNA upstream 142260 27257486 ~ 27292406 (-) False LOC110495938
XM_036952442.1 mRNA upstream 143614 27258840 ~ 27280895 (-) False LOC110495938
TU1753025 other downstream 1326901 25696539 ~ 25708874 (-) True G1531236
TU1752958 other downstream 1462104 25573438 ~ 25573671 (-) True LOC110495915
TU1752921 other downstream 1512595 25519421 ~ 25523180 (-) True G1531142
TU1752728 other downstream 1884781 25150068 ~ 25150994 (-) True G1530967
TU1751283 other downstream 2642091 24393375 ~ 24393684 (-) True G1529613
TU1755359 other upstream 72396 27187622 ~ 27188230 (-) False G1533378
TU1755360 other upstream 72396 27187622 ~ 27189549 (-) True G1533378
TU1755743 other upstream 638948 27754174 ~ 27798613 (-) True LOC110495948
TU1755806 other upstream 745820 27861046 ~ 27914520 (-) True LOC110496785
TU1755852 other upstream 919738 28034964 ~ 28036616 (-) False LOC110495955

Expression Profile