RNA id: TU1756260



Basic Information


Item Value
RNA id TU1756260
length 217
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G1534217
representative True

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 28402839 ~ 28403055 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggATTCAAGATTGAATCCAGtaaccctaggccgtcattgaaaataagaatgtgttcttaactgacttgcctagttaaataaaggtgttaaaaaAATCGGTggccaaaaataccgatttccgattgttatgaaaacttgaaatcggccctaattgttcggccattccgattaatcggtcgacctctagttgggaCTATGTTGAAGACCACTACCTACT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1756248 lncRNA downstream 7839 28394729 ~ 28395000 (-) True G1534205
TU1756241 lncRNA downstream 14952 28387391 ~ 28387887 (-) True G1534198
TU1756236 lncRNA downstream 17445 28385114 ~ 28385394 (-) True G1534193
TU1756227 lncRNA downstream 24672 28377667 ~ 28378167 (-) True G1534184
TU1756217 lncRNA downstream 32448 28370095 ~ 28370391 (-) True G1534174
TU1756261 lncRNA upstream 1043 28404098 ~ 28404307 (-) True G1534218
TU1756281 lncRNA upstream 13168 28416223 ~ 28416431 (-) True G1534238
TU1756302 lncRNA upstream 32377 28435432 ~ 28435686 (-) True G1534259
TU1756617 lncRNA upstream 108895 28511950 ~ 28515963 (-) True G1534535
TU1756680 lncRNA upstream 197691 28600746 ~ 28600979 (-) True G1534596
LOC110495963 mRNA downstream 34692 28241494 ~ 28368147 (-) False LOC110495963
XM_036952470.1 mRNA downstream 203081 28124599 ~ 28199758 (-) False LOC110495961
XM_036952471.1 mRNA downstream 203081 28127691 ~ 28199758 (-) False LOC110495961
XM_036952464.1 mRNA downstream 310643 28055136 ~ 28092196 (-) False LOC110495955
XM_036952463.1 mRNA downstream 319639 28055136 ~ 28083200 (-) False LOC110495955
XM_021571539.2 mRNA upstream 269774 28672829 ~ 28675992 (-) True LOC110495969
XM_036952473.1 mRNA upstream 286067 28689122 ~ 28731312 (-) False LOC110495970
XM_036952474.1 mRNA upstream 286067 28689122 ~ 28731312 (-) False LOC110495970
XM_036952475.1 mRNA upstream 286067 28689122 ~ 28731312 (-) False LOC110495970
XM_036952476.1 mRNA upstream 286067 28689122 ~ 28731312 (-) False LOC110495970
TU1756202 other downstream 50221 28351378 ~ 28352618 (-) True LOC110495963
TU1755852 other downstream 366223 28034964 ~ 28036616 (-) False LOC110495955
TU1755806 other downstream 488319 27861046 ~ 27914520 (-) True LOC110496785
TU1755743 other downstream 604226 27754174 ~ 27798613 (-) True LOC110495948
TU1755360 other downstream 1213290 27187622 ~ 27189549 (-) True G1533378
TU1758870 other upstream 1881317 30284372 ~ 30284762 (-) True G1536703
TU1759222 other upstream 2116837 30519892 ~ 30525373 (-) True G1537022
TU1759310 other upstream 2199661 30602716 ~ 30603392 (-) True G1537091
TU1759986 other upstream 2508772 30911827 ~ 30914295 (-) False LOC110495992
TU1759987 other upstream 2511314 30914369 ~ 30953308 (-) True LOC110495992

Expression Profile