Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1763168 |
| length | 225 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G1540656 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 33537970 ~ 33538194 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1763130 | lncRNA | downstream | 23986 | 33508819 ~ 33513984 (-) | False | G1540627 |
| TU1763132 | lncRNA | downstream | 23986 | 33508819 ~ 33513984 (-) | True | G1540627 |
| TU1763160 | lncRNA | downstream | 29359 | 33508353 ~ 33508611 (-) | True | G1540648 |
| TU1763150 | lncRNA | downstream | 39671 | 33498069 ~ 33498299 (-) | True | G1540640 |
| TU1763147 | lncRNA | downstream | 43168 | 33494599 ~ 33494802 (-) | True | G1540637 |
| TU1763231 | lncRNA | upstream | 82242 | 33620436 ~ 33621322 (-) | True | G1540713 |
| TU1763139 | lncRNA | upstream | 85353 | 33623547 ~ 33623787 (-) | True | G1540633 |
| TU1763235 | lncRNA | upstream | 88785 | 33626979 ~ 33627240 (-) | True | G1540717 |
| TU1763566 | lncRNA | upstream | 118531 | 33656725 ~ 33656944 (-) | True | G1541007 |
| TU1763660 | lncRNA | upstream | 315693 | 33853887 ~ 33867357 (-) | True | lrp12 |
| XM_021571680.2 | mRNA | downstream | 4283 | 33526141 ~ 33533687 (-) | True | LOC110496042 |
| XM_021571681.2 | mRNA | downstream | 4293 | 33526141 ~ 33533677 (-) | False | LOC110496042 |
| XM_021571674.2 | mRNA | downstream | 123012 | 33392413 ~ 33414958 (-) | True | cdcp1b |
| XM_021571670.2 | mRNA | downstream | 158462 | 33366687 ~ 33379508 (-) | False | LOC110496036 |
| XM_021571671.2 | mRNA | downstream | 158462 | 33366687 ~ 33379508 (-) | False | LOC110496036 |
| XM_021571686.2 | mRNA | upstream | 22648 | 33560842 ~ 33573866 (-) | True | LOC110496044 |
| XM_021571687.2 | mRNA | upstream | 33820 | 33572014 ~ 33573707 (-) | True | LOC110496045 |
| XM_036952525.1 | mRNA | upstream | 41602 | 33579796 ~ 33581971 (-) | True | LOC110496046 |
| XM_021571689.2 | mRNA | upstream | 68755 | 33606949 ~ 33610948 (-) | False | LOC110496048 |
| XR_002469622.2 | mRNA | upstream | 104732 | 33642926 ~ 33652838 (-) | True | LOC110496928 |
| TU1762958 | other | downstream | 146218 | 33391339 ~ 33391752 (-) | True | G1540473 |
| TU1762604 | other | downstream | 601401 | 32899578 ~ 32936569 (-) | True | G1540148 |
| TU1761767 | other | downstream | 975850 | 32561726 ~ 32562120 (-) | True | G1539348 |
| TU1761118 | other | downstream | 1479185 | 32057311 ~ 32058785 (-) | True | atp5if1a |
| TU1760970 | other | downstream | 1822789 | 31714506 ~ 31715181 (-) | True | G1538595 |
| TU1763210 | other | upstream | 64280 | 33602474 ~ 33610893 (-) | False | LOC110496048 |
| TU1763213 | other | upstream | 65954 | 33604148 ~ 33610893 (-) | True | LOC110496048 |
| TU1763572 | other | upstream | 119447 | 33657641 ~ 33674231 (-) | True | LOC110496049 |
| TU1763897 | other | upstream | 623733 | 34161927 ~ 34162458 (-) | True | G1541318 |
| TU1765523 | other | upstream | 1197180 | 34735374 ~ 34739639 (-) | True | atp9b |
