RNA id: TU1764763



Basic Information


Item Value
RNA id TU1764763
length 599
lncRNA type read_through
GC content 0.49
exon number 2
gene id G1542057
representative False

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35431031 ~ 35444970 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CTCGTTCAGTCTGCTCCGCCCAGGTTCCTTTTACTTTACAACCTTTTTGATTGAGCCAGGCTTTCTGCCCCCCCTCTTAGGAACAACCACTTCTTTTTTCTTAATAGCTGCCACTACCTTACCAGGTTTACTAGCCTTGCCATGACCATTGCGTGGTTTAATTTCCTCTTCTTTGTCATCTTCTACTAGAGAAAAGACTTCATCCTCATTTCTCTGTGTATCTTCATTTTCCTCCTCTGAATCATACGCTGTATAATCAGCGTTCACAGACTTTCTCTTGCCTTTTTGCCTCTGGGCTTGGAAGGCAGCTTCATCGAACACATTTGCTTTACCGTTGGAGCGGCGGTAAAGCCTTACTATTGGAGAAACAGTGCAACCCTGTTTGGCTGAGGGTGAACTGTTGGACCTATCCGTCTCTGCTGCTCTCTTGGCTTTGAAGGAGCCTAAGGGACGGCCACTCTTTCGCGGGGAATCATCTTTAGCGGGGGGCTTTGAAACTTTAGAAGTTGGAGGTGGGTTCGTCTGTAAGTTGGCACCTCTATCTGTTGATGCCTTGAGTGGACGGCCTCTTCTCCGTGGCTCGGCAGAGGTGGGTGTGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1764726 lncRNA upstream 21955 35400723 ~ 35409076 (+) False G1542052
TU1764723 lncRNA upstream 22051 35400723 ~ 35408980 (+) False G1542052
TU1764693 lncRNA upstream 34033 35396381 ~ 35396998 (+) True G1542047
TU1764690 lncRNA upstream 36652 35394126 ~ 35394379 (+) True G1542044
TU1764689 lncRNA upstream 37852 35392954 ~ 35393179 (+) True G1542043
TU1764784 lncRNA downstream 45793 35484007 ~ 35491707 (+) True LOC118941148
TU1764713 lncRNA downstream 47612 35485826 ~ 35500577 (+) False G1542051
TU1764700 lncRNA downstream 48259 35486473 ~ 35502064 (+) False G1542051
TU1764704 lncRNA downstream 54780 35492994 ~ 35500650 (+) False G1542051
TU1764703 lncRNA downstream 54850 35493064 ~ 35502064 (+) False G1542051
XR_005037450.1 mRNA upstream 3066 35412771 ~ 35427965 (+) False LOC118941149
XM_036952546.1 mRNA upstream 82736 35335048 ~ 35348295 (+) False tomm40l
XR_005037437.1 mRNA downstream 2929 35441143 ~ 35504636 (+) False LOC118941148
XR_005037438.1 mRNA downstream 2929 35441143 ~ 35504636 (+) False LOC118941148
XR_005037439.1 mRNA downstream 2929 35441143 ~ 35504636 (+) False LOC118941148
XR_005037440.1 mRNA downstream 2929 35441143 ~ 35504636 (+) False LOC118941148
XR_005037441.1 mRNA downstream 2929 35441143 ~ 35504636 (+) False LOC118941148
TU1764739 other upstream 5845 35407928 ~ 35425186 (+) False G1542052
TU1764676 other upstream 44568 35375244 ~ 35386463 (+) False G1542037
TU1764682 other upstream 44568 35375380 ~ 35386463 (+) True G1542037
TU1764671 other upstream 51025 35375380 ~ 35380006 (+) False G1542037
TU1764613 other upstream 147325 35282603 ~ 35283706 (+) True G1541989
TU1764728 other downstream 14456 35452670 ~ 35481348 (+) True G1542052
TU1764702 other downstream 40621 35478835 ~ 35502933 (+) False G1542051
TU1764711 other downstream 55381 35493595 ~ 35502933 (+) True G1542051
TU1764796 other downstream 91329 35529543 ~ 35545979 (+) False G1542090
TU1764994 other downstream 397622 35835836 ~ 35836617 (+) True G1542253

Expression Profile