RNA id: TU1766867


Basic Information

Item Value
RNA id TU1766867
length 544
RNA type TUCP
GC content 0.51
exon number 2
gene id G1544007
representative True

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 36764294 ~ 36765233 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

AGGCAGTTTGGGCAAATGCCCAATGGGCCGGTCCATCGTTAGCTTAGTGGGCCGGTCTAAAAGGTTGTTGTGTTCCCTCACCTCAGTTCTGACTGGCTTCCAGGGCGTTTCCCCAGGCAGGTCTTCTCTGGGCGTGTCTGTCTCCACTCTGGGAGTGAAGTCTTTGGTGGAGTCCTGGGTGGGTTCTGCTTTGGGCACAATGTACAACGTGTTCACGGTCACCGCCTCCTCGATCACCTCCTCAGCAGTGCCTGATCCTGACCCCGAGTTAAAGTCGTCGTCATCCTCAGGGTAGTAACCCCCGGACCCTGTGTCGTCAATGAAAAGTTCATCCACTTCGGAGGACGACTTGGCCGCGTCCGCTATCTGAAATGGAGAACAACAGAAATCTAGACAAAGTACTGGGCATTTAGACTGTTCCCGAGGCCACTTTTCAATGCGCAAGTCCAACATAACTTTCTTATAGTCACCACTTTTGTCTTTGAAATACTTCTAGCAGTGAACACATTTCTGGATACCACGATCTGATTGTTTGGTAGAAAGC

Function

GO: NA

KEGG:

id description

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1766864 lncRNA upstream 3056 36667629 ~ 36761238 (+) False G1544005
TU1766865 lncRNA upstream 3056 36705998 ~ 36761238 (+) True G1544005
TU1766713 lncRNA upstream 196017 36568063 ~ 36568277 (+) True G1543857
TU1766587 lncRNA upstream 215627 36487474 ~ 36548667 (+) True G1543741
TU1766581 lncRNA upstream 281856 36482219 ~ 36482438 (+) True G1543735
TU1766925 lncRNA downstream 28 36765261 ~ 36765613 (+) True G1544063
TU1766926 lncRNA downstream 1555 36766788 ~ 36767006 (+) True G1544064
TU1766928 lncRNA downstream 7490 36772723 ~ 36772947 (+) True G1544066
TU1766935 lncRNA downstream 21470 36786703 ~ 36786985 (+) True G1544073
TU1766936 lncRNA downstream 22184 36787417 ~ 36787650 (+) True G1544074
XM_021571813.2 mRNA upstream 570444 36164916 ~ 36193850 (+) False med30
XM_021571814.2 mRNA upstream 570444 36164973 ~ 36193850 (+) False med30
XM_036952638.1 mRNA upstream 605903 36147703 ~ 36158391 (+) False LOC110496805
XM_036952639.1 mRNA upstream 605903 36148476 ~ 36158391 (+) True LOC110496805
XR_005037454.1 mRNA upstream 679528 36082109 ~ 36084766 (+) False LOC110496111
XM_036952643.1 mRNA downstream 89895 36855128 ~ 36931738 (+) False ext1c
XM_036952642.1 mRNA downstream 90571 36855804 ~ 36931738 (+) False ext1c
XM_036952644.1 mRNA downstream 90573 36855806 ~ 36931738 (+) False ext1c
XM_036952645.1 mRNA downstream 90573 36855806 ~ 36931738 (+) False ext1c
XM_036952646.1 mRNA downstream 90575 36855808 ~ 36931738 (+) False ext1c
TU1765133 other upstream 672688 36086776 ~ 36091606 (+) True LOC110496111
TU1765134 other upstream 675937 36076661 ~ 36088357 (+) False LOC110496111
TU1765069 other upstream 800589 35961201 ~ 35963705 (+) True G1542324
TU1765023 other upstream 893736 35870237 ~ 35870558 (+) True G1542282
TU1765003 other upstream 918098 35845814 ~ 35846196 (+) True G1542262
TU1766999 other downstream 97690 36862923 ~ 36863183 (+) True G1544137
TU1767350 other downstream 290750 37055983 ~ 37056487 (+) True G1544455
TU1768221 other downstream 1428019 38193252 ~ 38204455 (+) False LOC110496158
TU1768223 other downstream 1428019 38193252 ~ 38204455 (+) True LOC110496158
TU1768508 other downstream 1909794 38675027 ~ 38676004 (+) True G1545533

Expression Profile