Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1769425 |
| length | 298 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G1546312 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 38580177 ~ 38580474 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1769421 | lncRNA | downstream | 3831 | 38576132 ~ 38576346 (-) | True | G1546308 |
| TU1769414 | lncRNA | downstream | 9447 | 38563954 ~ 38570730 (-) | True | G1546303 |
| TU1769400 | lncRNA | downstream | 28533 | 38551397 ~ 38551644 (-) | True | G1546291 |
| TU1769356 | lncRNA | downstream | 51653 | 38522603 ~ 38528524 (-) | True | zn706 |
| TU1769352 | lncRNA | downstream | 61372 | 38518382 ~ 38518805 (-) | True | LOC118940976 |
| TU1769426 | lncRNA | upstream | 1112 | 38581586 ~ 38581888 (-) | True | G1546313 |
| TU1769429 | lncRNA | upstream | 4475 | 38584949 ~ 38585149 (-) | True | G1546316 |
| TU1769443 | lncRNA | upstream | 23926 | 38604400 ~ 38604663 (-) | True | G1546330 |
| TU1769444 | lncRNA | upstream | 24456 | 38604930 ~ 38605195 (-) | True | G1546331 |
| TU1769499 | lncRNA | upstream | 109287 | 38689761 ~ 38689983 (-) | True | G1546376 |
| XM_021571912.2 | mRNA | downstream | 16812 | 38557052 ~ 38563365 (-) | False | LOC110496167 |
| XM_021571911.2 | mRNA | downstream | 26245 | 38541066 ~ 38553932 (-) | False | LOC110496166 |
| NM_001160599.1 | mRNA | downstream | 51669 | 38522608 ~ 38528508 (-) | False | zn706 |
| XM_036951043.1 | mRNA | downstream | 60388 | 38517903 ~ 38519789 (-) | False | LOC118940976 |
| XM_021571909.2 | mRNA | downstream | 62103 | 38516015 ~ 38518074 (-) | True | LOC110496165 |
| XM_021571915.2 | mRNA | upstream | 30979 | 38611453 ~ 38617573 (-) | True | LOC110496170 |
| XM_021571922.2 | mRNA | upstream | 67886 | 38648360 ~ 38665437 (-) | False | LOC110496173 |
| XM_036952707.1 | mRNA | upstream | 67886 | 38648360 ~ 38665538 (-) | True | LOC110496173 |
| XM_036952708.1 | mRNA | upstream | 93904 | 38674378 ~ 38675377 (-) | False | LOC110496175 |
| XM_021571929.2 | mRNA | upstream | 383613 | 38964087 ~ 38972431 (-) | True | LOC110496183 |
| TU1769405 | other | downstream | 16859 | 38559649 ~ 38563318 (-) | True | LOC110496167 |
| TU1769139 | other | downstream | 366128 | 38165250 ~ 38214049 (-) | True | G1546053 |
| TU1769081 | other | downstream | 427945 | 38147590 ~ 38152232 (-) | False | LOC110496154 |
| TU1769086 | other | downstream | 427945 | 38147590 ~ 38152232 (-) | True | LOC110496154 |
| TU1768955 | other | downstream | 656843 | 37922155 ~ 37923334 (-) | True | ppt1 |
| TU1769487 | other | upstream | 93967 | 38674441 ~ 38676029 (-) | True | LOC110496175 |
| TU1769511 | other | upstream | 187623 | 38768097 ~ 38773684 (-) | True | G1546385 |
| TU1769526 | other | upstream | 195810 | 38776284 ~ 38787801 (-) | True | G1546396 |
| TU1770682 | other | upstream | 1045301 | 39625775 ~ 39631098 (-) | True | LOC110496208 |
| TU1770674 | other | upstream | 1062381 | 39642855 ~ 39646533 (-) | False | LOC110496816 |
