Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1771698 |
| length | 478 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 3 |
| gene id | G1548323 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 40170859 ~ 40182138 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1771691 | lncRNA | downstream | 1650 | 40154838 ~ 40169209 (-) | True | G1548317 |
| TU1771634 | lncRNA | downstream | 117258 | 40053375 ~ 40053601 (-) | True | G1548270 |
| TU1771621 | lncRNA | downstream | 140356 | 40029984 ~ 40030503 (-) | True | LOC110496213 |
| TU1771616 | lncRNA | downstream | 145417 | 40025236 ~ 40025442 (-) | True | G1548260 |
| TU1771613 | lncRNA | downstream | 148861 | 40021788 ~ 40021998 (-) | True | G1548257 |
| TU1771709 | lncRNA | upstream | 24501 | 40206639 ~ 40207042 (-) | True | G1548331 |
| TU1771755 | lncRNA | upstream | 52982 | 40235120 ~ 40239085 (-) | True | G1548376 |
| TU1771756 | lncRNA | upstream | 57414 | 40239552 ~ 40239752 (-) | True | G1548377 |
| TU1771759 | lncRNA | upstream | 63214 | 40245352 ~ 40245648 (-) | True | G1548380 |
| TU1771760 | lncRNA | upstream | 65865 | 40248003 ~ 40248270 (-) | True | G1548381 |
| NM_001124553.1 | mRNA | downstream | 40664 | 40125565 ~ 40130195 (-) | True | tapbp.1 |
| XM_036952779.1 | mRNA | downstream | 47988 | 40111013 ~ 40122871 (-) | False | LOC110496222 |
| XR_005037471.1 | mRNA | downstream | 47988 | 40111013 ~ 40122871 (-) | True | LOC110496222 |
| XM_036952780.1 | mRNA | downstream | 48310 | 40111013 ~ 40122549 (-) | False | LOC110496222 |
| XR_005037470.1 | mRNA | downstream | 83069 | 40087244 ~ 40087790 (-) | True | LOC110496219 |
| trnaa-ugc-138 | mRNA | upstream | 5004 | 40187142 ~ 40187215 (-) | True | trnaa-ugc-138 |
| XM_036952783.1 | mRNA | upstream | 26326 | 40208464 ~ 40209202 (-) | True | LOC118941158 |
| XM_036952782.1 | mRNA | upstream | 28146 | 40210284 ~ 40213780 (-) | True | LOC110496227 |
| XM_036952794.1 | mRNA | upstream | 136907 | 40319045 ~ 40369171 (-) | False | LOC110496231 |
| XM_036952793.1 | mRNA | upstream | 136907 | 40319045 ~ 40369172 (-) | False | LOC110496231 |
| TU1770684 | other | downstream | 482178 | 39684787 ~ 39688681 (-) | True | LOC110496816 |
| TU1770675 | other | downstream | 522845 | 39642855 ~ 39648014 (-) | False | LOC110496816 |
| TU1770674 | other | downstream | 524326 | 39642855 ~ 39646533 (-) | False | LOC110496816 |
| TU1770682 | other | downstream | 539761 | 39625775 ~ 39631098 (-) | True | LOC110496208 |
| TU1769526 | other | downstream | 1383058 | 38776284 ~ 38787801 (-) | True | G1546396 |
| TU1771745 | other | upstream | 203832 | 40385970 ~ 40391883 (-) | True | G1548367 |
| TU1771911 | other | upstream | 458037 | 40640175 ~ 40685641 (-) | True | G1548517 |
| TU1772024 | other | upstream | 723549 | 40905687 ~ 40908625 (-) | True | LOC118941164 |
| TU1773336 | other | upstream | 1481298 | 41663436 ~ 41671514 (-) | False | LOC110496277 |
| TU1773335 | other | upstream | 1486122 | 41668260 ~ 41671514 (-) | True | LOC110496277 |
