Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1779647 |
| length | 456 |
| lncRNA type | inter_gene |
| GC content | 0.57 |
| exon number | 1 |
| gene id | G1555458 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 47303843 ~ 47304298 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1779645 | lncRNA | downstream | 2315 | 47301182 ~ 47301528 (-) | True | G1555456 |
| TU1779643 | lncRNA | downstream | 4333 | 47299281 ~ 47299510 (-) | True | G1555454 |
| TU1779478 | lncRNA | downstream | 82887 | 47220732 ~ 47220956 (-) | True | G1555331 |
| TU1779455 | lncRNA | downstream | 108337 | 47190003 ~ 47195506 (-) | True | G1555314 |
| TU1779447 | lncRNA | downstream | 129331 | 47174235 ~ 47174512 (-) | True | G1555306 |
| TU1779656 | lncRNA | upstream | 16848 | 47321146 ~ 47324211 (-) | False | G1555467 |
| TU1779660 | lncRNA | upstream | 16848 | 47321146 ~ 47324211 (-) | False | G1555467 |
| TU1779661 | lncRNA | upstream | 16848 | 47321146 ~ 47326023 (-) | True | G1555467 |
| TU1779667 | lncRNA | upstream | 28290 | 47332588 ~ 47339837 (-) | False | G1555469 |
| TU1779664 | lncRNA | upstream | 28521 | 47332819 ~ 47333224 (-) | False | G1555469 |
| XM_036952961.1 | mRNA | downstream | 11635 | 47258150 ~ 47292208 (-) | True | LOC118941176 |
| XM_036952962.1 | mRNA | downstream | 43408 | 47258150 ~ 47260435 (-) | False | LOC118941176 |
| XM_036952963.1 | mRNA | downstream | 43425 | 47258150 ~ 47260418 (-) | False | LOC118941176 |
| XM_036952956.1 | mRNA | downstream | 52876 | 47248660 ~ 47250967 (-) | True | LOC118941174 |
| XM_036952957.1 | mRNA | downstream | 52919 | 47248660 ~ 47250924 (-) | False | LOC118941174 |
| XM_021572268.2 | mRNA | upstream | 22651 | 47326949 ~ 47328359 (-) | True | LOC110496393 |
| XM_021572276.2 | mRNA | upstream | 332223 | 47636521 ~ 47647411 (-) | True | LOC110496398 |
| LOC110496399 | mRNA | upstream | 502781 | 47807079 ~ 47808361 (-) | True | LOC110496399 |
| XM_036951068.1 | mRNA | upstream | 586282 | 47890580 ~ 47927015 (-) | False | LOC110496837 |
| XM_021572278.2 | mRNA | upstream | 678428 | 47982726 ~ 47986560 (-) | False | LOC110496401 |
| TU1779304 | other | downstream | 390928 | 46911977 ~ 46912915 (-) | True | G1555168 |
| TU1778112 | other | downstream | 1195741 | 46101248 ~ 46108102 (-) | True | G1554091 |
| TU1777652 | other | downstream | 1500795 | 45788099 ~ 45803048 (-) | True | G1553693 |
| TU1777651 | other | downstream | 1511710 | 45788099 ~ 45792133 (-) | False | G1553693 |
| TU1777490 | other | downstream | 1636103 | 45667361 ~ 45667740 (-) | True | G1553544 |
| TU1779770 | other | upstream | 239262 | 47543560 ~ 47546571 (-) | False | G1555543 |
| TU1780537 | other | upstream | 600541 | 47904839 ~ 47945574 (-) | True | LOC110496837 |
| TU1780583 | other | upstream | 678585 | 47982883 ~ 47983609 (-) | True | LOC110496401 |
| TU1780876 | other | upstream | 1052315 | 48356613 ~ 48356847 (-) | True | G1556577 |
| TU1783089 | other | upstream | 2663598 | 49967896 ~ 49968608 (-) | True | G1558535 |
