Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1780130 |
| length | 417 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 2 |
| gene id | G1555883 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 47716381 ~ 47724569 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1779997 | lncRNA | downstream | 29098 | 47686972 ~ 47687283 (-) | True | G1555758 |
| TU1779970 | lncRNA | downstream | 45821 | 47670041 ~ 47670560 (-) | True | G1555731 |
| TU1779938 | lncRNA | downstream | 73854 | 47641405 ~ 47642527 (-) | True | G1555699 |
| TU1779916 | lncRNA | downstream | 89333 | 47626820 ~ 47627048 (-) | True | G1555682 |
| TU1779819 | lncRNA | downstream | 152122 | 47563995 ~ 47564259 (-) | True | G1555585 |
| TU1780157 | lncRNA | upstream | 32932 | 47757501 ~ 47759406 (-) | True | G1555910 |
| TU1780159 | lncRNA | upstream | 36794 | 47761363 ~ 47761591 (-) | True | G1555912 |
| TU1780160 | lncRNA | upstream | 37694 | 47762263 ~ 47762486 (-) | True | G1555913 |
| TU1780161 | lncRNA | upstream | 37999 | 47762568 ~ 47762899 (-) | True | G1555914 |
| TU1780162 | lncRNA | upstream | 38396 | 47762965 ~ 47763205 (-) | True | G1555915 |
| XM_021572276.2 | mRNA | downstream | 68970 | 47636521 ~ 47647411 (-) | True | LOC110496398 |
| XM_021572268.2 | mRNA | downstream | 388022 | 47326949 ~ 47328359 (-) | True | LOC110496393 |
| XM_036952961.1 | mRNA | downstream | 424173 | 47258150 ~ 47292208 (-) | True | LOC118941176 |
| XM_036952962.1 | mRNA | downstream | 455946 | 47258150 ~ 47260435 (-) | False | LOC118941176 |
| XM_036952963.1 | mRNA | downstream | 455963 | 47258150 ~ 47260418 (-) | False | LOC118941176 |
| LOC110496399 | mRNA | upstream | 82510 | 47807079 ~ 47808361 (-) | True | LOC110496399 |
| XM_036951068.1 | mRNA | upstream | 166011 | 47890580 ~ 47927015 (-) | False | LOC110496837 |
| XM_021572278.2 | mRNA | upstream | 258157 | 47982726 ~ 47986560 (-) | False | LOC110496401 |
| XM_021572279.2 | mRNA | upstream | 277317 | 48001886 ~ 48022110 (-) | True | LOC110496402 |
| LOC110496403 | mRNA | upstream | 313289 | 48037858 ~ 48049720 (-) | True | LOC110496403 |
| TU1779770 | other | downstream | 169810 | 47543560 ~ 47546571 (-) | False | G1555543 |
| TU1779304 | other | downstream | 803466 | 46911977 ~ 46912915 (-) | True | G1555168 |
| TU1778112 | other | downstream | 1608279 | 46101248 ~ 46108102 (-) | True | G1554091 |
| TU1777652 | other | downstream | 1913333 | 45788099 ~ 45803048 (-) | True | G1553693 |
| TU1777651 | other | downstream | 1924248 | 45788099 ~ 45792133 (-) | False | G1553693 |
| TU1780537 | other | upstream | 180270 | 47904839 ~ 47945574 (-) | True | LOC110496837 |
| TU1780583 | other | upstream | 258314 | 47982883 ~ 47983609 (-) | True | LOC110496401 |
| TU1780876 | other | upstream | 632044 | 48356613 ~ 48356847 (-) | True | G1556577 |
| TU1783089 | other | upstream | 2243327 | 49967896 ~ 49968608 (-) | True | G1558535 |
| TU1783125 | other | upstream | 2298522 | 50023091 ~ 50034141 (-) | True | LOC110496434 |
