Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1780562 |
| length | 240 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 1 |
| gene id | G1556286 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 47946528 ~ 47946767 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1780559 | lncRNA | downstream | 42812 | 47903449 ~ 47903716 (-) | True | G1556283 |
| TU1780553 | lncRNA | downstream | 62090 | 47884074 ~ 47884438 (-) | True | G1556277 |
| TU1780552 | lncRNA | downstream | 63355 | 47882878 ~ 47883173 (-) | True | G1556276 |
| TU1780551 | lncRNA | downstream | 63793 | 47882499 ~ 47882735 (-) | True | G1556275 |
| TU1780548 | lncRNA | downstream | 68529 | 47877617 ~ 47877999 (-) | True | G1556272 |
| TU1780563 | lncRNA | upstream | 266 | 47947033 ~ 47947234 (-) | True | G1556287 |
| TU1780586 | lncRNA | upstream | 43235 | 47990002 ~ 47990207 (-) | True | G1556310 |
| TU1780587 | lncRNA | upstream | 44186 | 47990953 ~ 47991203 (-) | True | G1556311 |
| TU1780594 | lncRNA | upstream | 56411 | 48003178 ~ 48003497 (-) | True | G1556318 |
| TU1780595 | lncRNA | upstream | 57902 | 48004669 ~ 48004899 (-) | True | G1556319 |
| XM_036951068.1 | mRNA | downstream | 19513 | 47890580 ~ 47927015 (-) | False | LOC110496837 |
| LOC110496399 | mRNA | downstream | 138167 | 47807079 ~ 47808361 (-) | True | LOC110496399 |
| XM_021572276.2 | mRNA | downstream | 299117 | 47636521 ~ 47647411 (-) | True | LOC110496398 |
| XM_021572268.2 | mRNA | downstream | 618169 | 47326949 ~ 47328359 (-) | True | LOC110496393 |
| XM_036952961.1 | mRNA | downstream | 654320 | 47258150 ~ 47292208 (-) | True | LOC118941176 |
| XM_021572278.2 | mRNA | upstream | 35959 | 47982726 ~ 47986560 (-) | False | LOC110496401 |
| XM_021572279.2 | mRNA | upstream | 55119 | 48001886 ~ 48022110 (-) | True | LOC110496402 |
| LOC110496403 | mRNA | upstream | 91091 | 48037858 ~ 48049720 (-) | True | LOC110496403 |
| XM_036952968.1 | mRNA | upstream | 110255 | 48057022 ~ 48062162 (-) | True | LOC118941177 |
| XM_036952975.1 | mRNA | upstream | 445148 | 48391915 ~ 48661346 (-) | False | LOC110496838 |
| TU1780537 | other | downstream | 954 | 47904839 ~ 47945574 (-) | True | LOC110496837 |
| TU1779770 | other | downstream | 399957 | 47543560 ~ 47546571 (-) | False | G1555543 |
| TU1779304 | other | downstream | 1033613 | 46911977 ~ 46912915 (-) | True | G1555168 |
| TU1778112 | other | downstream | 1838426 | 46101248 ~ 46108102 (-) | True | G1554091 |
| TU1777652 | other | downstream | 2143480 | 45788099 ~ 45803048 (-) | True | G1553693 |
| TU1780583 | other | upstream | 36116 | 47982883 ~ 47983609 (-) | True | LOC110496401 |
| TU1780876 | other | upstream | 409846 | 48356613 ~ 48356847 (-) | True | G1556577 |
| TU1783089 | other | upstream | 2021129 | 49967896 ~ 49968608 (-) | True | G1558535 |
| TU1783125 | other | upstream | 2076324 | 50023091 ~ 50034141 (-) | True | LOC110496434 |
| TU1783393 | other | upstream | 2409502 | 50356269 ~ 50359030 (-) | True | LOC110496438 |
