Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1783270 |
| length | 290 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G1558698 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 50244941 ~ 50245230 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1783209 | lncRNA | downstream | 80720 | 50159687 ~ 50164221 (-) | True | G1558641 |
| TU1783217 | lncRNA | downstream | 86683 | 50157799 ~ 50158258 (-) | True | G1558649 |
| TU1783207 | lncRNA | downstream | 93827 | 50150898 ~ 50151114 (-) | True | G1558639 |
| TU1783113 | lncRNA | downstream | 238363 | 50006344 ~ 50006578 (-) | True | G1558557 |
| TU1783107 | lncRNA | downstream | 242959 | 49992109 ~ 50001982 (-) | True | G1558551 |
| TU1783271 | lncRNA | upstream | 324 | 50245554 ~ 50245787 (-) | True | G1558699 |
| TU1783272 | lncRNA | upstream | 631 | 50245861 ~ 50246108 (-) | True | G1558700 |
| TU1783273 | lncRNA | upstream | 1022 | 50246252 ~ 50246627 (-) | True | G1558701 |
| TU1783277 | lncRNA | upstream | 6001 | 50251231 ~ 50251456 (-) | True | G1558705 |
| TU1783296 | lncRNA | upstream | 8477 | 50253707 ~ 50254163 (-) | False | G1558709 |
| XR_005037496.1 | mRNA | downstream | 47727 | 50152023 ~ 50197214 (-) | True | LOC118941183 |
| NM_001165089.2 | mRNA | downstream | 95336 | 50148304 ~ 50149605 (-) | True | rfa3 |
| XM_036953015.1 | mRNA | downstream | 101573 | 50105282 ~ 50143368 (-) | True | LOC110496842 |
| XM_036953016.1 | mRNA | downstream | 103536 | 50105282 ~ 50141405 (-) | False | LOC110496842 |
| XM_036953014.1 | mRNA | downstream | 210774 | 50023087 ~ 50034167 (-) | False | LOC110496434 |
| XM_036953024.1 | mRNA | upstream | 10791 | 50256021 ~ 50359132 (-) | False | LOC110496438 |
| XM_036953025.1 | mRNA | upstream | 10791 | 50256021 ~ 50359132 (-) | False | LOC110496438 |
| XM_021572345.2 | mRNA | upstream | 10792 | 50256022 ~ 50359132 (-) | False | LOC110496438 |
| XM_021572346.2 | mRNA | upstream | 10792 | 50256022 ~ 50359132 (-) | False | LOC110496438 |
| XM_021572347.2 | mRNA | upstream | 10792 | 50256022 ~ 50359132 (-) | False | LOC110496438 |
| TU1783125 | other | downstream | 210800 | 50023091 ~ 50034141 (-) | True | LOC110496434 |
| TU1783089 | other | downstream | 276333 | 49967896 ~ 49968608 (-) | True | G1558535 |
| TU1780876 | other | downstream | 1888094 | 48356613 ~ 48356847 (-) | True | G1556577 |
| TU1780583 | other | downstream | 2261332 | 47982883 ~ 47983609 (-) | True | LOC110496401 |
| TU1780537 | other | downstream | 2299367 | 47904839 ~ 47945574 (-) | True | LOC110496837 |
| TU1783393 | other | upstream | 111039 | 50356269 ~ 50359030 (-) | True | LOC110496438 |
| TU1783548 | other | upstream | 191767 | 50436997 ~ 50437459 (-) | True | G1558916 |
| TU1783852 | other | upstream | 377861 | 50623091 ~ 50623983 (-) | True | G1559205 |
| TU1783839 | other | upstream | 390173 | 50635403 ~ 50650253 (-) | True | thsd7aa |
| TU1785000 | other | upstream | 967925 | 51213155 ~ 51214144 (-) | True | LOC110496463 |
