Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1783945 |
| length | 216 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G1559298 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 50775791 ~ 50776006 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1783940 | lncRNA | downstream | 3940 | 50771414 ~ 50771851 (-) | True | G1559293 |
| TU1783933 | lncRNA | downstream | 14447 | 50761076 ~ 50761344 (-) | True | G1559286 |
| TU1783929 | lncRNA | downstream | 23569 | 50752023 ~ 50752222 (-) | True | G1559282 |
| TU1783924 | lncRNA | downstream | 32317 | 50743205 ~ 50743474 (-) | True | G1559277 |
| TU1783906 | lncRNA | downstream | 51157 | 50724344 ~ 50724634 (-) | True | G1559259 |
| TU1784758 | lncRNA | upstream | 44544 | 50820550 ~ 50831810 (-) | True | G1560047 |
| TU1784759 | lncRNA | upstream | 47046 | 50823052 ~ 50827733 (-) | True | G1560048 |
| TU1784775 | lncRNA | upstream | 89250 | 50865256 ~ 50866640 (-) | True | G1560064 |
| TU1784785 | lncRNA | upstream | 94287 | 50870293 ~ 50882732 (-) | True | G1560073 |
| TU1784796 | lncRNA | upstream | 106798 | 50882804 ~ 50883054 (-) | True | G1560082 |
| XM_021572358.2 | mRNA | downstream | 19799 | 50599955 ~ 50755992 (-) | False | thsd7aa |
| XM_036953027.1 | mRNA | downstream | 183380 | 50543379 ~ 50592411 (-) | True | LOC110496443 |
| XM_036953022.1 | mRNA | downstream | 416659 | 50256022 ~ 50359132 (-) | False | LOC110496438 |
| XM_021572364.2 | mRNA | upstream | 221517 | 50997523 ~ 51012139 (-) | False | LOC110496448 |
| XM_021572365.2 | mRNA | upstream | 221517 | 50997523 ~ 51012139 (-) | True | LOC110496448 |
| XM_021572367.2 | mRNA | upstream | 270396 | 51046402 ~ 51049503 (-) | True | LOC110496450 |
| XM_021572366.2 | mRNA | upstream | 276761 | 51052767 ~ 51067584 (-) | True | LOC110496449 |
| XM_021572371.2 | mRNA | upstream | 318086 | 51094092 ~ 51096890 (-) | False | agr2 |
| TU1783839 | other | downstream | 125538 | 50635403 ~ 50650253 (-) | True | thsd7aa |
| TU1783852 | other | downstream | 151808 | 50623091 ~ 50623983 (-) | True | G1559205 |
| TU1783548 | other | downstream | 338332 | 50436997 ~ 50437459 (-) | True | G1558916 |
| TU1783393 | other | downstream | 416761 | 50356269 ~ 50359030 (-) | True | LOC110496438 |
| TU1783125 | other | downstream | 741650 | 50023091 ~ 50034141 (-) | True | LOC110496434 |
| TU1785000 | other | upstream | 437149 | 51213155 ~ 51214144 (-) | True | LOC110496463 |
| TU1785112 | other | upstream | 606666 | 51382672 ~ 51455285 (-) | False | G1560339 |
| TU1786046 | other | upstream | 1403314 | 52179320 ~ 52183207 (-) | True | trak1b |
| TU1786055 | other | upstream | 1473348 | 52249354 ~ 52250489 (-) | True | G1561167 |
| TU1786137 | other | upstream | 1580746 | 52356752 ~ 52357310 (-) | False | LOC110496491 |
