Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1788106 |
| length | 678 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G1562831 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 53778153 ~ 53781014 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1788089 | lncRNA | downstream | 26072 | 53751835 ~ 53752081 (-) | True | G1562815 |
| TU1788085 | lncRNA | downstream | 30286 | 53747596 ~ 53747867 (-) | True | G1562811 |
| TU1787994 | lncRNA | downstream | 31118 | 53744392 ~ 53747035 (-) | True | LOC118941188 |
| TU1787997 | lncRNA | downstream | 34700 | 53734170 ~ 53743453 (-) | True | G1562730 |
| TU1788098 | lncRNA | upstream | 36032 | 53817046 ~ 53822742 (-) | True | G1562823 |
| TU1788101 | lncRNA | upstream | 41915 | 53822929 ~ 53866397 (-) | True | G1562826 |
| TU1788102 | lncRNA | upstream | 50938 | 53831952 ~ 53842917 (-) | True | G1562827 |
| TU1788112 | lncRNA | upstream | 54453 | 53835467 ~ 53844084 (-) | True | G1562837 |
| TU1788104 | lncRNA | upstream | 61592 | 53842606 ~ 53870650 (-) | True | G1562829 |
| XR_005037512.1 | mRNA | downstream | 31146 | 53744387 ~ 53747007 (-) | False | LOC118941188 |
| XR_002469564.2 | mRNA | downstream | 37101 | 53738342 ~ 53741052 (-) | False | LOC110496535 |
| XR_002469563.2 | mRNA | downstream | 72520 | 53703762 ~ 53705633 (-) | False | LOC110496534 |
| XM_021572482.2 | mRNA | downstream | 107651 | 53663547 ~ 53670502 (-) | True | aste1b |
| XM_021572483.2 | mRNA | downstream | 107693 | 53663547 ~ 53670460 (-) | False | aste1b |
| XM_036953264.1 | mRNA | upstream | 106123 | 53887137 ~ 53894981 (-) | False | mrpl3 |
| XM_036953263.1 | mRNA | upstream | 106123 | 53887137 ~ 53895002 (-) | False | mrpl3 |
| XM_036953265.1 | mRNA | upstream | 121234 | 53902248 ~ 53915395 (-) | True | cpne4b |
| XM_021572498.2 | mRNA | upstream | 267850 | 54048864 ~ 54085680 (-) | False | atxn1a |
| XM_036953268.1 | mRNA | upstream | 267850 | 54048864 ~ 54206719 (-) | False | atxn1a |
| TU1788090 | other | downstream | 25470 | 53752406 ~ 53752683 (-) | True | G1562816 |
| TU1787983 | other | downstream | 149731 | 53621900 ~ 53628422 (-) | False | tomm7 |
| TU1788031 | other | downstream | 175459 | 53598650 ~ 53602694 (-) | True | G1562762 |
| TU1786175 | other | downstream | 1130376 | 52644989 ~ 52647777 (-) | True | G1561279 |
| TU1786137 | other | downstream | 1420843 | 52356752 ~ 52357310 (-) | False | LOC110496491 |
| TU1788103 | other | upstream | 93396 | 53874410 ~ 53875592 (-) | True | G1562828 |
| TU1788095 | other | upstream | 108695 | 53889709 ~ 53894949 (-) | True | mrpl3 |
| TU1788544 | other | upstream | 857853 | 54638867 ~ 54652850 (-) | True | LOC110496860 |
| TU1788592 | other | upstream | 879612 | 54660626 ~ 54665643 (-) | True | G1563253 |
| TU1790620 | other | upstream | 2700454 | 56481468 ~ 56488289 (-) | True | G1565122 |
