Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1788128 |
| length | 323 |
| lncRNA type | intronic |
| GC content | 0.33 |
| exon number | 1 |
| gene id | G1562852 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 53880861 ~ 53881183 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1788104 | lncRNA | downstream | 10211 | 53842606 ~ 53870650 (-) | True | G1562829 |
| TU1788101 | lncRNA | downstream | 14464 | 53822929 ~ 53866397 (-) | True | G1562826 |
| TU1788112 | lncRNA | downstream | 36777 | 53835467 ~ 53844084 (-) | True | G1562837 |
| TU1788102 | lncRNA | downstream | 37944 | 53831952 ~ 53842917 (-) | True | G1562827 |
| TU1788098 | lncRNA | downstream | 58119 | 53817046 ~ 53822742 (-) | True | G1562823 |
| TU1788134 | lncRNA | upstream | 183 | 53881366 ~ 53883069 (-) | False | G1562853 |
| TU1788129 | lncRNA | upstream | 867 | 53882050 ~ 53883069 (-) | True | G1562853 |
| TU1788135 | lncRNA | upstream | 1894 | 53883077 ~ 53884156 (-) | True | G1562854 |
| TU1788138 | lncRNA | upstream | 14791 | 53895974 ~ 53896404 (-) | True | G1562857 |
| TU1788137 | lncRNA | upstream | 15597 | 53896780 ~ 53898361 (-) | True | G1562856 |
| XR_005037512.1 | mRNA | downstream | 133854 | 53744387 ~ 53747007 (-) | False | LOC118941188 |
| XR_002469564.2 | mRNA | downstream | 139809 | 53738342 ~ 53741052 (-) | False | LOC110496535 |
| XR_002469563.2 | mRNA | downstream | 175228 | 53703762 ~ 53705633 (-) | False | LOC110496534 |
| XM_021572482.2 | mRNA | downstream | 210359 | 53663547 ~ 53670502 (-) | True | aste1b |
| XM_021572483.2 | mRNA | downstream | 210401 | 53663547 ~ 53670460 (-) | False | aste1b |
| XM_036953264.1 | mRNA | upstream | 5954 | 53887137 ~ 53894981 (-) | False | mrpl3 |
| XM_036953263.1 | mRNA | upstream | 5954 | 53887137 ~ 53895002 (-) | False | mrpl3 |
| XM_036953265.1 | mRNA | upstream | 21065 | 53902248 ~ 53915395 (-) | True | cpne4b |
| XM_021572498.2 | mRNA | upstream | 167681 | 54048864 ~ 54085680 (-) | False | atxn1a |
| XM_036953268.1 | mRNA | upstream | 167681 | 54048864 ~ 54206719 (-) | False | atxn1a |
| TU1788103 | other | downstream | 5269 | 53874410 ~ 53875592 (-) | True | G1562828 |
| TU1788090 | other | downstream | 128178 | 53752406 ~ 53752683 (-) | True | G1562816 |
| TU1787983 | other | downstream | 252439 | 53621900 ~ 53628422 (-) | False | tomm7 |
| TU1788031 | other | downstream | 278167 | 53598650 ~ 53602694 (-) | True | G1562762 |
| TU1786175 | other | downstream | 1233084 | 52644989 ~ 52647777 (-) | True | G1561279 |
| TU1788095 | other | upstream | 8526 | 53889709 ~ 53894949 (-) | True | mrpl3 |
| TU1788544 | other | upstream | 757684 | 54638867 ~ 54652850 (-) | True | LOC110496860 |
| TU1788592 | other | upstream | 779443 | 54660626 ~ 54665643 (-) | True | G1563253 |
| TU1790620 | other | upstream | 2600285 | 56481468 ~ 56488289 (-) | True | G1565122 |
| TU1790882 | other | upstream | 2847169 | 56728352 ~ 56737347 (-) | True | LOC110496560 |
