Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1788141 |
| length | 209 |
| lncRNA type | intronic |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G1562860 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 53908067 ~ 53908275 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1788140 | lncRNA | downstream | 2505 | 53905262 ~ 53905562 (-) | True | G1562859 |
| TU1788137 | lncRNA | downstream | 9706 | 53896780 ~ 53898361 (-) | True | G1562856 |
| TU1788138 | lncRNA | downstream | 11663 | 53895974 ~ 53896404 (-) | True | G1562857 |
| TU1788135 | lncRNA | downstream | 23911 | 53883077 ~ 53884156 (-) | True | G1562854 |
| TU1788134 | lncRNA | downstream | 24998 | 53881366 ~ 53883069 (-) | False | G1562853 |
| TU1788151 | lncRNA | upstream | 16385 | 53924660 ~ 53925478 (-) | True | G1562868 |
| TU1788149 | lncRNA | upstream | 19446 | 53927721 ~ 53928165 (-) | True | G1562866 |
| TU1788224 | lncRNA | upstream | 97811 | 54006086 ~ 54008006 (-) | True | G1562930 |
| TU1788179 | lncRNA | upstream | 135823 | 54044098 ~ 54047835 (-) | True | G1562891 |
| TU1788181 | lncRNA | upstream | 148861 | 54057136 ~ 54244118 (-) | True | atxn1a |
| XM_036953263.1 | mRNA | downstream | 13065 | 53887137 ~ 53895002 (-) | False | mrpl3 |
| XM_036953264.1 | mRNA | downstream | 13086 | 53887137 ~ 53894981 (-) | False | mrpl3 |
| XR_005037512.1 | mRNA | downstream | 161060 | 53744387 ~ 53747007 (-) | False | LOC118941188 |
| XR_002469564.2 | mRNA | downstream | 167015 | 53738342 ~ 53741052 (-) | False | LOC110496535 |
| XR_002469563.2 | mRNA | downstream | 202434 | 53703762 ~ 53705633 (-) | False | LOC110496534 |
| XM_021572498.2 | mRNA | upstream | 140589 | 54048864 ~ 54085680 (-) | False | atxn1a |
| XM_036953268.1 | mRNA | upstream | 140589 | 54048864 ~ 54206719 (-) | False | atxn1a |
| XM_036953267.1 | mRNA | upstream | 140589 | 54048864 ~ 54244154 (-) | False | atxn1a |
| XR_005037513.1 | mRNA | upstream | 140589 | 54048864 ~ 54244154 (-) | False | atxn1a |
| XM_036953269.1 | mRNA | upstream | 140589 | 54048864 ~ 54244155 (-) | False | atxn1a |
| TU1788095 | other | downstream | 13118 | 53889709 ~ 53894949 (-) | True | mrpl3 |
| TU1788103 | other | downstream | 32475 | 53874410 ~ 53875592 (-) | True | G1562828 |
| TU1788090 | other | downstream | 155384 | 53752406 ~ 53752683 (-) | True | G1562816 |
| TU1787983 | other | downstream | 279645 | 53621900 ~ 53628422 (-) | False | tomm7 |
| TU1788031 | other | downstream | 305373 | 53598650 ~ 53602694 (-) | True | G1562762 |
| TU1788544 | other | upstream | 730592 | 54638867 ~ 54652850 (-) | True | LOC110496860 |
| TU1788592 | other | upstream | 752351 | 54660626 ~ 54665643 (-) | True | G1563253 |
| TU1790620 | other | upstream | 2573193 | 56481468 ~ 56488289 (-) | True | G1565122 |
| TU1790882 | other | upstream | 2820077 | 56728352 ~ 56737347 (-) | True | LOC110496560 |
| TU1792637 | other | upstream | 4119236 | 58027511 ~ 58027790 (-) | True | G1566899 |
