Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1788324 |
| length | 292 |
| lncRNA type | intronic |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G1563015 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 54215427 ~ 54215762 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1788280 | lncRNA | downstream | 91645 | 54123462 ~ 54123782 (-) | True | G1562978 |
| TU1788179 | lncRNA | downstream | 167592 | 54044098 ~ 54047835 (-) | True | G1562891 |
| TU1788224 | lncRNA | downstream | 207421 | 54006086 ~ 54008006 (-) | True | G1562930 |
| TU1788149 | lncRNA | downstream | 287262 | 53927721 ~ 53928165 (-) | True | G1562866 |
| TU1788151 | lncRNA | downstream | 289949 | 53924660 ~ 53925478 (-) | True | G1562868 |
| TU1788307 | lncRNA | upstream | 19286 | 54235048 ~ 54235442 (-) | True | G1563002 |
| TU1788371 | lncRNA | upstream | 100363 | 54316125 ~ 54317470 (-) | True | LOC118941189 |
| TU1788411 | lncRNA | upstream | 153359 | 54369121 ~ 54371307 (-) | True | G1563100 |
| TU1788546 | lncRNA | upstream | 341782 | 54557544 ~ 54567610 (-) | True | G1563217 |
| TU1788572 | lncRNA | upstream | 390993 | 54606755 ~ 54609700 (-) | True | G1563234 |
| XM_036953268.1 | mRNA | downstream | 8708 | 54048864 ~ 54206719 (-) | False | atxn1a |
| XM_021572498.2 | mRNA | downstream | 129747 | 54048864 ~ 54085680 (-) | False | atxn1a |
| XM_036953265.1 | mRNA | downstream | 300032 | 53902248 ~ 53915395 (-) | True | cpne4b |
| XM_036953263.1 | mRNA | downstream | 320425 | 53887137 ~ 53895002 (-) | False | mrpl3 |
| XM_036953264.1 | mRNA | downstream | 320446 | 53887137 ~ 53894981 (-) | False | mrpl3 |
| XM_021572499.2 | mRNA | upstream | 64782 | 54280544 ~ 54286577 (-) | True | LOC110496543 |
| XM_021572500.2 | mRNA | upstream | 98462 | 54314224 ~ 54315645 (-) | True | LOC110496544 |
| XM_036953272.1 | mRNA | upstream | 100362 | 54316124 ~ 54317624 (-) | False | LOC118941189 |
| XM_036953273.1 | mRNA | upstream | 100362 | 54316124 ~ 54317624 (-) | False | LOC118941189 |
| XM_036953285.1 | mRNA | upstream | 309931 | 54525693 ~ 54534269 (-) | False | tpd52 |
| TU1788095 | other | downstream | 320478 | 53889709 ~ 53894949 (-) | True | mrpl3 |
| TU1788103 | other | downstream | 339835 | 53874410 ~ 53875592 (-) | True | G1562828 |
| TU1788090 | other | downstream | 462744 | 53752406 ~ 53752683 (-) | True | G1562816 |
| TU1787983 | other | downstream | 587005 | 53621900 ~ 53628422 (-) | False | tomm7 |
| TU1788031 | other | downstream | 612733 | 53598650 ~ 53602694 (-) | True | G1562762 |
| TU1788544 | other | upstream | 423105 | 54638867 ~ 54652850 (-) | True | LOC110496860 |
| TU1788592 | other | upstream | 444864 | 54660626 ~ 54665643 (-) | True | G1563253 |
| TU1790620 | other | upstream | 2265706 | 56481468 ~ 56488289 (-) | True | G1565122 |
| TU1790882 | other | upstream | 2512590 | 56728352 ~ 56737347 (-) | True | LOC110496560 |
| TU1792637 | other | upstream | 3811749 | 58027511 ~ 58027790 (-) | True | G1566899 |
