Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1788727 |
| length | 448 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G1563372 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 54937059 ~ 54937506 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1788725 | lncRNA | downstream | 1593 | 54935256 ~ 54935466 (-) | True | G1563370 |
| TU1788724 | lncRNA | downstream | 2142 | 54934690 ~ 54934917 (-) | True | G1563369 |
| TU1788679 | lncRNA | downstream | 63891 | 54872786 ~ 54873168 (-) | True | G1563328 |
| TU1788615 | lncRNA | downstream | 119730 | 54814861 ~ 54817329 (-) | True | G1563272 |
| TU1788627 | lncRNA | downstream | 216550 | 54720215 ~ 54720509 (-) | True | G1563284 |
| TU1788732 | lncRNA | upstream | 5639 | 54943145 ~ 54943722 (-) | True | G1563377 |
| TU1789000 | lncRNA | upstream | 123760 | 55061266 ~ 55064066 (-) | False | G1563630 |
| TU1789004 | lncRNA | upstream | 123760 | 55061266 ~ 55062907 (-) | False | G1563630 |
| TU1789002 | lncRNA | upstream | 124241 | 55061747 ~ 55062319 (-) | True | G1563630 |
| TU1789090 | lncRNA | upstream | 226887 | 55164393 ~ 55237210 (-) | True | G1563704 |
| XM_036953300.1 | mRNA | downstream | 83215 | 54842434 ~ 54853844 (-) | True | LOC118941190 |
| XM_021572521.2 | mRNA | downstream | 97137 | 54827717 ~ 54839922 (-) | True | LOC110496552 |
| XM_021572874.2 | mRNA | downstream | 284127 | 54636849 ~ 54652932 (-) | False | LOC110496860 |
| XM_021572507.2 | mRNA | downstream | 384742 | 54525695 ~ 54552317 (-) | True | tpd52 |
| XM_036953286.1 | mRNA | downstream | 402796 | 54525695 ~ 54534263 (-) | False | tpd52 |
| XM_036953314.1 | mRNA | upstream | 1767346 | 56704852 ~ 56726308 (-) | True | LOC110496559 |
| XM_021572529.2 | mRNA | upstream | 1790835 | 56728341 ~ 56737379 (-) | False | LOC110496560 |
| XM_021572528.2 | mRNA | upstream | 1790835 | 56728341 ~ 56737381 (-) | False | LOC110496560 |
| LOC110496863 | mRNA | upstream | 2121031 | 57058537 ~ 57061029 (-) | True | LOC110496863 |
| XM_021572540.2 | mRNA | upstream | 2130334 | 57067840 ~ 57070602 (-) | False | LOC110496566 |
| TU1788592 | other | downstream | 271416 | 54660626 ~ 54665643 (-) | True | G1563253 |
| TU1788544 | other | downstream | 284209 | 54638867 ~ 54652850 (-) | True | LOC110496860 |
| TU1788095 | other | downstream | 1042110 | 53889709 ~ 53894949 (-) | True | mrpl3 |
| TU1788103 | other | downstream | 1061467 | 53874410 ~ 53875592 (-) | True | G1562828 |
| TU1788090 | other | downstream | 1184376 | 53752406 ~ 53752683 (-) | True | G1562816 |
| TU1790620 | other | upstream | 1543962 | 56481468 ~ 56488289 (-) | True | G1565122 |
| TU1790882 | other | upstream | 1790846 | 56728352 ~ 56737347 (-) | True | LOC110496560 |
| TU1792637 | other | upstream | 3090005 | 58027511 ~ 58027790 (-) | True | G1566899 |
| TU1792666 | other | upstream | 3138117 | 58075623 ~ 58078146 (-) | True | G1566923 |
| TU1792723 | other | upstream | 3229878 | 58167384 ~ 58167697 (-) | True | G1566972 |
