Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1789168 |
| length | 497 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G1563777 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 55314805 ~ 55315301 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1789151 | lncRNA | downstream | 25687 | 55288193 ~ 55289118 (-) | True | G1563761 |
| TU1789090 | lncRNA | downstream | 77595 | 55164393 ~ 55237210 (-) | True | G1563704 |
| TU1789049 | lncRNA | downstream | 101647 | 55191989 ~ 55213158 (-) | False | G1563671 |
| TU1789050 | lncRNA | downstream | 101647 | 55191989 ~ 55213158 (-) | False | G1563671 |
| TU1789052 | lncRNA | downstream | 101647 | 55191989 ~ 55213158 (-) | False | G1563671 |
| TU1789170 | lncRNA | upstream | 2499 | 55317800 ~ 55318086 (-) | True | G1563779 |
| TU1789371 | lncRNA | upstream | 102412 | 55417713 ~ 55420680 (-) | True | G1563969 |
| TU1789374 | lncRNA | upstream | 109678 | 55424979 ~ 55433774 (-) | True | G1563971 |
| TU1789435 | lncRNA | upstream | 214251 | 55529552 ~ 55529810 (-) | True | G1564030 |
| TU1789467 | lncRNA | upstream | 240937 | 55556238 ~ 55556548 (-) | True | G1564062 |
| XM_036953300.1 | mRNA | downstream | 460961 | 54842434 ~ 54853844 (-) | True | LOC118941190 |
| XM_021572521.2 | mRNA | downstream | 474883 | 54827717 ~ 54839922 (-) | True | LOC110496552 |
| XM_021572874.2 | mRNA | downstream | 661873 | 54636849 ~ 54652932 (-) | False | LOC110496860 |
| XM_021572507.2 | mRNA | downstream | 762488 | 54525695 ~ 54552317 (-) | True | tpd52 |
| XM_036953286.1 | mRNA | downstream | 780542 | 54525695 ~ 54534263 (-) | False | tpd52 |
| XM_036953314.1 | mRNA | upstream | 1389551 | 56704852 ~ 56726308 (-) | True | LOC110496559 |
| XM_021572529.2 | mRNA | upstream | 1413040 | 56728341 ~ 56737379 (-) | False | LOC110496560 |
| XM_021572528.2 | mRNA | upstream | 1413040 | 56728341 ~ 56737381 (-) | False | LOC110496560 |
| LOC110496863 | mRNA | upstream | 1743236 | 57058537 ~ 57061029 (-) | True | LOC110496863 |
| XM_021572540.2 | mRNA | upstream | 1752539 | 57067840 ~ 57070602 (-) | False | LOC110496566 |
| TU1788592 | other | downstream | 649162 | 54660626 ~ 54665643 (-) | True | G1563253 |
| TU1788544 | other | downstream | 661955 | 54638867 ~ 54652850 (-) | True | LOC110496860 |
| TU1788095 | other | downstream | 1419856 | 53889709 ~ 53894949 (-) | True | mrpl3 |
| TU1788103 | other | downstream | 1439213 | 53874410 ~ 53875592 (-) | True | G1562828 |
| TU1788090 | other | downstream | 1562122 | 53752406 ~ 53752683 (-) | True | G1562816 |
| TU1790620 | other | upstream | 1166167 | 56481468 ~ 56488289 (-) | True | G1565122 |
| TU1790882 | other | upstream | 1413051 | 56728352 ~ 56737347 (-) | True | LOC110496560 |
| TU1792637 | other | upstream | 2712210 | 58027511 ~ 58027790 (-) | True | G1566899 |
| TU1792666 | other | upstream | 2760322 | 58075623 ~ 58078146 (-) | True | G1566923 |
| TU1792723 | other | upstream | 2852083 | 58167384 ~ 58167697 (-) | True | G1566972 |
