Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1789974 |
| length | 246 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G1564508 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 55875467 ~ 55877180 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1789969 | lncRNA | downstream | 1110 | 55872834 ~ 55874357 (-) | False | G1564506 |
| TU1789970 | lncRNA | downstream | 1110 | 55873162 ~ 55874357 (-) | True | G1564506 |
| TU1789759 | lncRNA | downstream | 148055 | 55724667 ~ 55727412 (-) | True | G1564334 |
| TU1789665 | lncRNA | downstream | 199874 | 55592770 ~ 55675593 (-) | True | G1564243 |
| TU1789986 | lncRNA | upstream | 19703 | 55896883 ~ 55897407 (-) | True | G1564517 |
| TU1789990 | lncRNA | upstream | 24320 | 55901500 ~ 55904338 (-) | False | G1564520 |
| TU1789991 | lncRNA | upstream | 24320 | 55901500 ~ 55904338 (-) | True | G1564520 |
| TU1790005 | lncRNA | upstream | 61671 | 55938851 ~ 55939087 (-) | True | G1564532 |
| TU1790009 | lncRNA | upstream | 67362 | 55944542 ~ 55944823 (-) | True | G1564536 |
| XM_036953300.1 | mRNA | downstream | 1021623 | 54842434 ~ 54853844 (-) | True | LOC118941190 |
| XM_021572521.2 | mRNA | downstream | 1035545 | 54827717 ~ 54839922 (-) | True | LOC110496552 |
| XM_021572874.2 | mRNA | downstream | 1222535 | 54636849 ~ 54652932 (-) | False | LOC110496860 |
| XM_021572507.2 | mRNA | downstream | 1323150 | 54525695 ~ 54552317 (-) | True | tpd52 |
| XM_036953286.1 | mRNA | downstream | 1341204 | 54525695 ~ 54534263 (-) | False | tpd52 |
| XM_036953314.1 | mRNA | upstream | 827672 | 56704852 ~ 56726308 (-) | True | LOC110496559 |
| XM_021572529.2 | mRNA | upstream | 851161 | 56728341 ~ 56737379 (-) | False | LOC110496560 |
| XM_021572528.2 | mRNA | upstream | 851161 | 56728341 ~ 56737381 (-) | False | LOC110496560 |
| LOC110496863 | mRNA | upstream | 1181357 | 57058537 ~ 57061029 (-) | True | LOC110496863 |
| XM_021572540.2 | mRNA | upstream | 1190660 | 57067840 ~ 57070602 (-) | False | LOC110496566 |
| TU1788592 | other | downstream | 1209824 | 54660626 ~ 54665643 (-) | True | G1563253 |
| TU1788544 | other | downstream | 1222617 | 54638867 ~ 54652850 (-) | True | LOC110496860 |
| TU1788095 | other | downstream | 1980518 | 53889709 ~ 53894949 (-) | True | mrpl3 |
| TU1788103 | other | downstream | 1999875 | 53874410 ~ 53875592 (-) | True | G1562828 |
| TU1788090 | other | downstream | 2122784 | 53752406 ~ 53752683 (-) | True | G1562816 |
| TU1790620 | other | upstream | 604288 | 56481468 ~ 56488289 (-) | True | G1565122 |
| TU1790882 | other | upstream | 851172 | 56728352 ~ 56737347 (-) | True | LOC110496560 |
| TU1792637 | other | upstream | 2150331 | 58027511 ~ 58027790 (-) | True | G1566899 |
| TU1792666 | other | upstream | 2198443 | 58075623 ~ 58078146 (-) | True | G1566923 |
| TU1792723 | other | upstream | 2290204 | 58167384 ~ 58167697 (-) | True | G1566972 |
