Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1790087 |
| length | 319 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G1564613 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 56027532 ~ 56027850 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1790080 | lncRNA | downstream | 3402 | 56023777 ~ 56024130 (-) | True | G1564606 |
| TU1790036 | lncRNA | downstream | 38976 | 55988212 ~ 55988556 (-) | True | G1564563 |
| TU1790033 | lncRNA | downstream | 44188 | 55983097 ~ 55983344 (-) | True | G1564560 |
| TU1790030 | lncRNA | downstream | 44754 | 55982559 ~ 55982778 (-) | True | G1564557 |
| TU1790011 | lncRNA | downstream | 50434 | 55948744 ~ 55977098 (-) | True | G1564538 |
| TU1790489 | lncRNA | upstream | 160508 | 56188358 ~ 56188632 (-) | True | G1564991 |
| TU1790490 | lncRNA | upstream | 162470 | 56190320 ~ 56190532 (-) | True | G1564992 |
| TU1790491 | lncRNA | upstream | 163035 | 56190885 ~ 56191203 (-) | True | G1564993 |
| TU1790495 | lncRNA | upstream | 169748 | 56197598 ~ 56197797 (-) | True | G1564997 |
| TU1790568 | lncRNA | upstream | 301766 | 56329616 ~ 56329883 (-) | True | G1565070 |
| XM_036953300.1 | mRNA | downstream | 1173688 | 54842434 ~ 54853844 (-) | True | LOC118941190 |
| XM_021572521.2 | mRNA | downstream | 1187610 | 54827717 ~ 54839922 (-) | True | LOC110496552 |
| XM_021572874.2 | mRNA | downstream | 1374600 | 54636849 ~ 54652932 (-) | False | LOC110496860 |
| XM_021572507.2 | mRNA | downstream | 1475215 | 54525695 ~ 54552317 (-) | True | tpd52 |
| XM_036953286.1 | mRNA | downstream | 1493269 | 54525695 ~ 54534263 (-) | False | tpd52 |
| XM_036953314.1 | mRNA | upstream | 677002 | 56704852 ~ 56726308 (-) | True | LOC110496559 |
| XM_021572529.2 | mRNA | upstream | 700491 | 56728341 ~ 56737379 (-) | False | LOC110496560 |
| XM_021572528.2 | mRNA | upstream | 700491 | 56728341 ~ 56737381 (-) | False | LOC110496560 |
| LOC110496863 | mRNA | upstream | 1030687 | 57058537 ~ 57061029 (-) | True | LOC110496863 |
| XM_021572540.2 | mRNA | upstream | 1039990 | 57067840 ~ 57070602 (-) | False | LOC110496566 |
| TU1788592 | other | downstream | 1361889 | 54660626 ~ 54665643 (-) | True | G1563253 |
| TU1788544 | other | downstream | 1374682 | 54638867 ~ 54652850 (-) | True | LOC110496860 |
| TU1788095 | other | downstream | 2132583 | 53889709 ~ 53894949 (-) | True | mrpl3 |
| TU1788103 | other | downstream | 2151940 | 53874410 ~ 53875592 (-) | True | G1562828 |
| TU1788090 | other | downstream | 2274849 | 53752406 ~ 53752683 (-) | True | G1562816 |
| TU1790620 | other | upstream | 453618 | 56481468 ~ 56488289 (-) | True | G1565122 |
| TU1790882 | other | upstream | 700502 | 56728352 ~ 56737347 (-) | True | LOC110496560 |
| TU1792637 | other | upstream | 1999661 | 58027511 ~ 58027790 (-) | True | G1566899 |
| TU1792666 | other | upstream | 2047773 | 58075623 ~ 58078146 (-) | True | G1566923 |
| TU1792723 | other | upstream | 2139534 | 58167384 ~ 58167697 (-) | True | G1566972 |
