Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1790652 |
| length | 601 |
| lncRNA type | intronic |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G1565148 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 56462935 ~ 56463575 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1790624 | lncRNA | downstream | 54271 | 56406486 ~ 56408664 (-) | True | G1565125 |
| TU1790595 | lncRNA | downstream | 99124 | 56363502 ~ 56363811 (-) | True | G1565097 |
| TU1790568 | lncRNA | downstream | 133052 | 56329616 ~ 56329883 (-) | True | G1565070 |
| TU1790495 | lncRNA | downstream | 265138 | 56197598 ~ 56197797 (-) | True | G1564997 |
| TU1790491 | lncRNA | downstream | 271732 | 56190885 ~ 56191203 (-) | True | G1564993 |
| TU1790668 | lncRNA | upstream | 1276 | 56464851 ~ 56465162 (-) | True | G1565163 |
| TU1790677 | lncRNA | upstream | 29082 | 56492657 ~ 56496239 (-) | False | G1565171 |
| TU1790678 | lncRNA | upstream | 29082 | 56492657 ~ 56496239 (-) | True | G1565171 |
| TU1790649 | lncRNA | upstream | 38721 | 56502296 ~ 56504360 (-) | True | G1565146 |
| TU1790685 | lncRNA | upstream | 46651 | 56510226 ~ 56510436 (-) | True | G1565178 |
| XM_036953300.1 | mRNA | downstream | 1609091 | 54842434 ~ 54853844 (-) | True | LOC118941190 |
| XM_021572521.2 | mRNA | downstream | 1623013 | 54827717 ~ 54839922 (-) | True | LOC110496552 |
| XM_021572874.2 | mRNA | downstream | 1810003 | 54636849 ~ 54652932 (-) | False | LOC110496860 |
| XM_021572507.2 | mRNA | downstream | 1910618 | 54525695 ~ 54552317 (-) | True | tpd52 |
| XM_036953286.1 | mRNA | downstream | 1928672 | 54525695 ~ 54534263 (-) | False | tpd52 |
| XM_036953314.1 | mRNA | upstream | 241277 | 56704852 ~ 56726308 (-) | True | LOC110496559 |
| XM_021572529.2 | mRNA | upstream | 264766 | 56728341 ~ 56737379 (-) | False | LOC110496560 |
| XM_021572528.2 | mRNA | upstream | 264766 | 56728341 ~ 56737381 (-) | False | LOC110496560 |
| LOC110496863 | mRNA | upstream | 594962 | 57058537 ~ 57061029 (-) | True | LOC110496863 |
| XM_021572540.2 | mRNA | upstream | 604265 | 57067840 ~ 57070602 (-) | False | LOC110496566 |
| TU1788592 | other | downstream | 1797292 | 54660626 ~ 54665643 (-) | True | G1563253 |
| TU1788544 | other | downstream | 1810085 | 54638867 ~ 54652850 (-) | True | LOC110496860 |
| TU1788095 | other | downstream | 2567986 | 53889709 ~ 53894949 (-) | True | mrpl3 |
| TU1788103 | other | downstream | 2587343 | 53874410 ~ 53875592 (-) | True | G1562828 |
| TU1788090 | other | downstream | 2710252 | 53752406 ~ 53752683 (-) | True | G1562816 |
| TU1790620 | other | upstream | 17893 | 56481468 ~ 56488289 (-) | True | G1565122 |
| TU1790882 | other | upstream | 264777 | 56728352 ~ 56737347 (-) | True | LOC110496560 |
| TU1792637 | other | upstream | 1563936 | 58027511 ~ 58027790 (-) | True | G1566899 |
| TU1792666 | other | upstream | 1612048 | 58075623 ~ 58078146 (-) | True | G1566923 |
| TU1792723 | other | upstream | 1703809 | 58167384 ~ 58167697 (-) | True | G1566972 |
