Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1790685 |
| length | 211 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G1565178 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 56510226 ~ 56510436 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1790649 | lncRNA | downstream | 5866 | 56502296 ~ 56504360 (-) | True | G1565146 |
| TU1790677 | lncRNA | downstream | 13987 | 56492657 ~ 56496239 (-) | False | G1565171 |
| TU1790678 | lncRNA | downstream | 13987 | 56492657 ~ 56496239 (-) | True | G1565171 |
| TU1790668 | lncRNA | downstream | 45064 | 56464851 ~ 56465162 (-) | True | G1565163 |
| TU1790652 | lncRNA | downstream | 46651 | 56462935 ~ 56463575 (-) | True | G1565148 |
| TU1790847 | lncRNA | upstream | 52779 | 56563215 ~ 56563496 (-) | True | G1565322 |
| TU1790848 | lncRNA | upstream | 56660 | 56567096 ~ 56567331 (-) | True | G1565323 |
| TU1790930 | lncRNA | upstream | 186386 | 56696822 ~ 56697137 (-) | False | G1565401 |
| TU1790931 | lncRNA | upstream | 186386 | 56696822 ~ 56697137 (-) | True | G1565401 |
| TU1790936 | lncRNA | upstream | 190992 | 56701428 ~ 56704109 (-) | False | G1565404 |
| XM_036953300.1 | mRNA | downstream | 1656382 | 54842434 ~ 54853844 (-) | True | LOC118941190 |
| XM_021572521.2 | mRNA | downstream | 1670304 | 54827717 ~ 54839922 (-) | True | LOC110496552 |
| XM_021572874.2 | mRNA | downstream | 1857294 | 54636849 ~ 54652932 (-) | False | LOC110496860 |
| XM_021572507.2 | mRNA | downstream | 1957909 | 54525695 ~ 54552317 (-) | True | tpd52 |
| XM_036953286.1 | mRNA | downstream | 1975963 | 54525695 ~ 54534263 (-) | False | tpd52 |
| XM_036953314.1 | mRNA | upstream | 194416 | 56704852 ~ 56726308 (-) | True | LOC110496559 |
| XM_021572529.2 | mRNA | upstream | 217905 | 56728341 ~ 56737379 (-) | False | LOC110496560 |
| XM_021572528.2 | mRNA | upstream | 217905 | 56728341 ~ 56737381 (-) | False | LOC110496560 |
| LOC110496863 | mRNA | upstream | 548101 | 57058537 ~ 57061029 (-) | True | LOC110496863 |
| XM_021572540.2 | mRNA | upstream | 557404 | 57067840 ~ 57070602 (-) | False | LOC110496566 |
| TU1790620 | other | downstream | 21937 | 56481468 ~ 56488289 (-) | True | G1565122 |
| TU1788592 | other | downstream | 1844583 | 54660626 ~ 54665643 (-) | True | G1563253 |
| TU1788544 | other | downstream | 1857376 | 54638867 ~ 54652850 (-) | True | LOC110496860 |
| TU1788095 | other | downstream | 2615277 | 53889709 ~ 53894949 (-) | True | mrpl3 |
| TU1788103 | other | downstream | 2634634 | 53874410 ~ 53875592 (-) | True | G1562828 |
| TU1790882 | other | upstream | 217916 | 56728352 ~ 56737347 (-) | True | LOC110496560 |
| TU1792637 | other | upstream | 1517075 | 58027511 ~ 58027790 (-) | True | G1566899 |
| TU1792666 | other | upstream | 1565187 | 58075623 ~ 58078146 (-) | True | G1566923 |
| TU1792723 | other | upstream | 1656948 | 58167384 ~ 58167697 (-) | True | G1566972 |
| TU1792861 | other | upstream | 1900063 | 58410499 ~ 58411129 (-) | True | G1567080 |
