RNA id: TU1795525


Basic Information

Item Value
RNA id TU1795525
length 343
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G1569299
representative True

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 60414193 ~ 60424693 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

agagagagcggagagagcgaGTGGAGAGAGCAGAAATGACAAGATACTCTCCAGCTattactctccctctctattttcctctccatctctccgtatctctcgctctcttcctatctctcgctctcttcctctctctctgtatctctttctctctgtatctctctctctctgtatatctctctctctgtatcactcgctctcgctctctcctgtgGAAGAACTCTGATCCAAGAGACTGCCACTTGCAGTACACATACAATgccgcgctctctctctgctctctctgctctctctctctgctctcgctctccgctctctctctctccgctctctctctccgctc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1795515 lncRNA downstream 9651 60404060 ~ 60404542 (-) True G1569290
TU1795495 lncRNA downstream 26334 60378914 ~ 60387859 (-) False G1569276
TU1795494 lncRNA downstream 26334 60379649 ~ 60387859 (-) True G1569276
TU1795492 lncRNA downstream 29841 60377989 ~ 60384352 (-) True G1569274
TU1795491 lncRNA downstream 30803 60376975 ~ 60383390 (-) True G1569273
TU1795540 lncRNA upstream 17967 60442660 ~ 60442985 (-) True G1569312
TU1795542 lncRNA upstream 21092 60445785 ~ 60447859 (-) True G1569313
TU1795543 lncRNA upstream 25936 60450629 ~ 60451445 (-) True G1569314
TU1795566 lncRNA upstream 50062 60474755 ~ 60475118 (-) True G1569333
TU1795571 lncRNA upstream 57046 60481739 ~ 60483080 (-) True G1569338
XR_002469583.2 mRNA downstream 39322 60372518 ~ 60374871 (-) False LOC110496648
XR_002469585.2 mRNA downstream 39322 60372518 ~ 60374871 (-) False LOC110496648
XR_002469584.2 mRNA downstream 39324 60372518 ~ 60374869 (-) False LOC110496648
XM_036953420.1 mRNA downstream 159469 60201948 ~ 60254724 (-) True LOC110496644
XM_036953421.1 mRNA downstream 159471 60201948 ~ 60254722 (-) False LOC110496644
XM_036953434.1 mRNA upstream 356 60425049 ~ 60470121 (-) False LOC110496650
XM_036953430.1 mRNA upstream 356 60425049 ~ 60568860 (-) False LOC110496650
XM_036953431.1 mRNA upstream 356 60425049 ~ 60603916 (-) False LOC110496650
XM_036953429.1 mRNA upstream 356 60425049 ~ 60603918 (-) False LOC110496650
XM_036953432.1 mRNA upstream 356 60425049 ~ 60603918 (-) False LOC110496650
TU1795498 other downstream 25101 60379853 ~ 60389092 (-) True G1569277
TU1795466 other downstream 63434 60348776 ~ 60350759 (-) True G1569258
TU1795401 other downstream 162824 60241931 ~ 60251369 (-) True G1569198
TU1794475 other downstream 677413 59729179 ~ 59736780 (-) True LOC110496637
TU1794038 other downstream 1257149 59155028 ~ 59157044 (-) True G1568017
TU1795654 other upstream 185794 60610487 ~ 60616016 (-) False LOC110496651
TU1795648 other upstream 187099 60611792 ~ 60616292 (-) False LOC110496651
TU1795650 other upstream 187099 60611792 ~ 60612891 (-) False LOC110496651
TU1795655 other upstream 187472 60612165 ~ 60616016 (-) True LOC110496651
TU1795693 other upstream 268685 60693378 ~ 60694099 (-) True G1569439

Expression Profile