Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1802804 |
| length | 347 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 1 |
| gene id | G1575628 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 66503390 ~ 66503736 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1802785 | lncRNA | downstream | 30599 | 66472292 ~ 66472791 (-) | True | G1575609 |
| TU1802784 | lncRNA | downstream | 31116 | 66471989 ~ 66472274 (-) | True | G1575608 |
| TU1802782 | lncRNA | downstream | 49251 | 66453821 ~ 66454139 (-) | True | G1575606 |
| TU1802777 | lncRNA | downstream | 72516 | 66429882 ~ 66430874 (-) | True | G1575601 |
| TU1802773 | lncRNA | downstream | 80602 | 66421821 ~ 66422788 (-) | True | G1575597 |
| TU1802806 | lncRNA | upstream | 11240 | 66514976 ~ 66515294 (-) | True | G1575630 |
| TU1802807 | lncRNA | upstream | 12345 | 66516081 ~ 66516582 (-) | True | G1575631 |
| TU1802829 | lncRNA | upstream | 54821 | 66558557 ~ 66559097 (-) | False | G1575651 |
| TU1802830 | lncRNA | upstream | 54821 | 66558557 ~ 66559159 (-) | False | G1575651 |
| TU1802831 | lncRNA | upstream | 54821 | 66558557 ~ 66559097 (-) | True | G1575651 |
| XM_036953570.1 | mRNA | downstream | 189491 | 66294113 ~ 66313899 (-) | True | ddx39b |
| XM_036953569.1 | mRNA | downstream | 260665 | 66240524 ~ 66242725 (-) | False | ppp1r11 |
| XM_036953559.1 | mRNA | downstream | 288183 | 66180577 ~ 66215207 (-) | False | LOC110496716 |
| XM_036953560.1 | mRNA | downstream | 323799 | 66170696 ~ 66179591 (-) | True | LOC110496892 |
| XM_036953561.1 | mRNA | downstream | 323866 | 66170696 ~ 66179524 (-) | False | LOC110496892 |
| XM_021572765.2 | mRNA | upstream | 189602 | 66693338 ~ 66696327 (-) | True | LOC110496727 |
| XM_036953579.1 | mRNA | upstream | 244446 | 66748182 ~ 66775080 (-) | False | LOC110496726 |
| XM_036953580.1 | mRNA | upstream | 244446 | 66748182 ~ 66775081 (-) | True | LOC110496726 |
| LOC110496895 | mRNA | upstream | 283312 | 66787048 ~ 66788994 (-) | True | LOC110496895 |
| XM_021572762.2 | mRNA | upstream | 299134 | 66802870 ~ 66810173 (-) | False | LOC110496725 |
| TU1802697 | other | downstream | 198214 | 66301415 ~ 66305176 (-) | True | G1575541 |
| TU1802672 | other | downstream | 260694 | 66238098 ~ 66242696 (-) | False | ppp1r11 |
| TU1802673 | other | downstream | 260694 | 66238098 ~ 66242696 (-) | True | ppp1r11 |
| TU1802627 | other | downstream | 447151 | 66055682 ~ 66056239 (-) | True | G1575475 |
| TU1802602 | other | downstream | 449655 | 66014469 ~ 66053735 (-) | True | G1575457 |
| TU1802943 | other | upstream | 299688 | 66803424 ~ 66810064 (-) | False | LOC110496725 |
| TU1802944 | other | upstream | 299688 | 66803424 ~ 66810466 (-) | True | LOC110496725 |
| TU1802980 | other | upstream | 322846 | 66826582 ~ 66826877 (-) | True | G1575774 |
| TU1803003 | other | upstream | 366155 | 66869891 ~ 66870199 (-) | True | LOC118941007 |
| TU1803115 | other | upstream | 554441 | 67058177 ~ 67058673 (-) | True | LOC118941008 |
