Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1802963 |
| length | 355 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 3 |
| gene id | G1575762 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 66790109 ~ 66791051 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1802935 | lncRNA | downstream | 34667 | 66752695 ~ 66755442 (-) | False | G1575739 |
| TU1802936 | lncRNA | downstream | 34667 | 66752695 ~ 66755442 (-) | True | G1575739 |
| TU1802934 | lncRNA | downstream | 36626 | 66752695 ~ 66753483 (-) | False | G1575739 |
| TU1802932 | lncRNA | downstream | 43447 | 66746449 ~ 66746662 (-) | True | G1575737 |
| TU1802931 | lncRNA | downstream | 46201 | 66742104 ~ 66743908 (-) | True | G1575736 |
| TU1802966 | lncRNA | upstream | 6099 | 66797150 ~ 66798183 (-) | True | G1575765 |
| TU1802946 | lncRNA | upstream | 8106 | 66799157 ~ 66802471 (-) | True | G1575747 |
| TU1802986 | lncRNA | upstream | 45489 | 66836540 ~ 66836924 (-) | True | G1575780 |
| TU1803008 | lncRNA | upstream | 85859 | 66876910 ~ 66877138 (-) | True | G1575802 |
| TU1803011 | lncRNA | upstream | 90402 | 66881453 ~ 66891836 (-) | True | G1575804 |
| LOC110496895 | mRNA | downstream | 1115 | 66787048 ~ 66788994 (-) | True | LOC110496895 |
| XM_036953580.1 | mRNA | downstream | 15028 | 66748182 ~ 66775081 (-) | True | LOC110496726 |
| XM_036953579.1 | mRNA | downstream | 15029 | 66748182 ~ 66775080 (-) | False | LOC110496726 |
| XM_021572765.2 | mRNA | downstream | 93782 | 66693338 ~ 66696327 (-) | True | LOC110496727 |
| XM_036953570.1 | mRNA | downstream | 476210 | 66294113 ~ 66313899 (-) | True | ddx39b |
| XM_021572762.2 | mRNA | upstream | 11819 | 66802870 ~ 66810173 (-) | False | LOC110496725 |
| XM_021572763.2 | mRNA | upstream | 11819 | 66802870 ~ 66810492 (-) | False | LOC110496725 |
| LOC118941007 | mRNA | upstream | 66886 | 66857937 ~ 66870926 (-) | False | LOC118941007 |
| XM_036951080.1 | mRNA | upstream | 267073 | 67058124 ~ 67058549 (-) | False | LOC118941008 |
| XM_021572761.2 | mRNA | upstream | 317527 | 67108578 ~ 67112583 (-) | False | sox4a |
| TU1802697 | other | downstream | 484933 | 66301415 ~ 66305176 (-) | True | G1575541 |
| TU1802672 | other | downstream | 547413 | 66238098 ~ 66242696 (-) | False | ppp1r11 |
| TU1802673 | other | downstream | 547413 | 66238098 ~ 66242696 (-) | True | ppp1r11 |
| TU1802627 | other | downstream | 733870 | 66055682 ~ 66056239 (-) | True | G1575475 |
| TU1802602 | other | downstream | 736374 | 66014469 ~ 66053735 (-) | True | G1575457 |
| TU1802943 | other | upstream | 12373 | 66803424 ~ 66810064 (-) | False | LOC110496725 |
| TU1802944 | other | upstream | 12373 | 66803424 ~ 66810466 (-) | True | LOC110496725 |
| TU1802980 | other | upstream | 35531 | 66826582 ~ 66826877 (-) | True | G1575774 |
| TU1803003 | other | upstream | 78840 | 66869891 ~ 66870199 (-) | True | LOC118941007 |
| TU1803115 | other | upstream | 267126 | 67058177 ~ 67058673 (-) | True | LOC118941008 |
